Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
NICN1Q9BSH3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
NICN1Q9BSH3 MTND4P5-201ENST00000435821 1374 ntBASIC1.69□□□□□ -2.14
NICN1Q9BSH3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 Y_RNA.86-201ENST00000363020 111 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 Y_RNA.135-201ENST00000363439 95 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 Y_RNA.212-201ENST00000364177 102 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 SNORA26.3-201ENST00000391119 136 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 HMGN2P39-201ENST00000398005 273 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 SUMO2P12-201ENST00000405924 140 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 RNU6-373P-201ENST00000411247 98 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AC096920.1-201ENST00000423991 241 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 TRBVA-201ENST00000498804 316 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AC005741.1-201ENST00000511094 432 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 RNU6-667P-201ENST00000517186 102 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AC115990.1-201ENST00000526957 301 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 MRPS36P4-201ENST00000534436 298 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AC092794.1-201ENST00000612734 582 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AL132822.1-201ENST00000617063 513 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AC008121.3-201ENST00000618726 433 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 MIR1248-201ENST00000629190 106 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AL133216.2-202ENST00000634512 349 ntBASIC1.68□□□□□ -2.14
NICN1Q9BSH3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NICN1Q9BSH3 AC009541.1-201ENST00000438279 2662 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 AC092881.1-201ENST00000638218 2733 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 RNU6-227P-201ENST00000362865 103 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 RNU6-743P-201ENST00000364151 106 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 XGY1-201ENST00000381172 446 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 MIR561-201ENST00000385216 97 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 AL158823.1-201ENST00000418441 478 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 ZNF885P-201ENST00000420174 1098 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 AC078809.1-201ENST00000427601 140 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.67□□□□□ -2.14
NICN1Q9BSH3 FGF7P6-202ENST00000451282 293 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.67□□□□□ -2.14
NICN1Q9BSH3 RNU6-864P-201ENST00000516256 108 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 RN7SKP256-201ENST00000517201 314 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.67□□□□□ -2.14
NICN1Q9BSH3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.67□□□□□ -2.14
NICN1Q9BSH3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.67□□□□□ -2.14
NICN1Q9BSH3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.67□□□□□ -2.14
NICN1Q9BSH3 AC023043.2-201ENST00000589678 1026 ntBASIC1.67□□□□□ -2.14
NICN1Q9BSH3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.67□□□□□ -2.14
NICN1Q9BSH3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.67□□□□□ -2.14
NICN1Q9BSH3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
NICN1Q9BSH3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
NICN1Q9BSH3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 Y_RNA.157-201ENST00000363638 102 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 SNORD32B-201ENST00000364460 84 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 Y_RNA.248-201ENST00000364501 109 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 SNORD116-11-201ENST00000383882 92 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 RNU6-546P-201ENST00000383991 107 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 RNU6-378P-201ENST00000384324 107 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 SNORA67.3-201ENST00000384366 140 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 SNORA64-201ENST00000384674 134 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 MIR29B2-201ENST00000385055 81 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 RN7SKP32-201ENST00000410167 303 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 RNA5SP201-201ENST00000410316 124 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 RNU2-20P-201ENST00000410425 191 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.66□□□□□ -2.14
NICN1Q9BSH3 snoU13.6-201ENST00000458785 104 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AC022447.4-201ENST00000504053 364 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AC021146.2-201ENST00000504736 556 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AC096745.1-201ENST00000509945 370 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.66□□□□□ -2.14
NICN1Q9BSH3 RNU4-49P-201ENST00000516080 140 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AC034114.1-201ENST00000520293 285 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AP005639.2-201ENST00000527592 928 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AC007375.1-201ENST00000554513 578 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 MIR3945-201ENST00000581853 98 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AC018638.8-201ENST00000588755 281 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AL031274.2-201ENST00000599419 203 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 Z98751.3-201ENST00000604447 521 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AL133215.3-201ENST00000609801 448 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AC122108.2-201ENST00000611946 526 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.66□□□□□ -2.14
NICN1Q9BSH3 AP000560.1-201ENST00000624150 1937 ntBASIC1.66□□□□□ -2.14
NICN1Q9BSH3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
NICN1Q9BSH3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
NICN1Q9BSH3 RNU6-562P-201ENST00000362731 107 ntBASIC1.65□□□□□ -2.15
NICN1Q9BSH3 Y_RNA.301-201ENST00000364990 103 ntBASIC1.65□□□□□ -2.15
NICN1Q9BSH3 RNU6-128P-201ENST00000383976 107 ntBASIC1.65□□□□□ -2.15
NICN1Q9BSH3 RNU6-142P-201ENST00000384019 107 ntBASIC1.65□□□□□ -2.15
NICN1Q9BSH3 MIR521-1-201ENST00000384902 87 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms