Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.07□□□□□ -1.76
ZKSCAN3Q9BRR0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU6-1272P-201ENST00000362776 107 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR3074-201ENST00000384885 81 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 U3.26-201ENST00000391236 204 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR208B-201ENST00000401172 77 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 BMS1P22-201ENST00000414726 313 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 RNA5SP310-201ENST00000459084 116 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 AC140059.1-201ENST00000489238 361 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR3609-201ENST00000582661 80 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 SNRPGP20-201ENST00000604477 205 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 AL162713.1-201ENST00000604480 262 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR7851-201ENST00000610611 160 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 AC019176.2-201ENST00000611579 315 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR3674-201ENST00000636576 68 ntBASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZKSCAN3Q9BRR0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AL133383.2-201ENST00000622958 2336 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 SNORA18.3-201ENST00000384122 132 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 SNORA1.3-201ENST00000384676 136 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 Y_RNA.571-201ENST00000384753 98 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR7-3-201ENST00000384898 110 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 Y_RNA.580-201ENST00000391004 95 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU6-1199P-201ENST00000411249 104 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 RPS29P31-201ENST00000446147 164 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 RPL21P10-201ENST00000463521 490 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AC107626.1-201ENST00000471084 183 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AIG1P1-201ENST00000503376 148 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU2-58P-201ENST00000516403 183 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AC105137.2-201ENST00000569073 466 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 AL133393.1-201ENST00000603277 287 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZKSCAN3Q9BRR0 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 Y_RNA.272-201ENST00000364696 102 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 RNA5SP475-201ENST00000410568 110 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 AC002075.2-201ENST00000425207 252 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 BTF3P11-201ENST00000426582 477 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 PRSS3P4-201ENST00000453323 162 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 HMGB3P3-201ENST00000510526 400 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU1-61P-201ENST00000516107 151 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR3923-201ENST00000579521 83 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 HMGN2P15-201ENST00000585707 270 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 DEFB117-201ENST00000602356 141 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 AL008718.3-201ENST00000610217 321 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.04□□□□□ -1.76
ZKSCAN3Q9BRR0 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 CEP170P1-201ENST00000502249 4587 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 SNORA63.1-201ENST00000362493 131 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR549A-201ENST00000385268 96 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR1183-201ENST00000408856 89 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 RNU5E-9P-201ENST00000411164 104 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 AC009963.1-201ENST00000417265 157 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 RPL23AP82-202ENST00000427528 469 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 RPS15AP5-201ENST00000436276 388 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 RPS4XP13-201ENST00000483219 789 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 MIR2114-201ENST00000516645 80 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 AC006380.1-201ENST00000603598 186 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 uc_338.32-201ENST00000615087 172 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 AC244205.2-202ENST00000635781 342 ntBASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
ZKSCAN3Q9BRR0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.03□□□□□ -1.77
ZKSCAN3Q9BRR0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms