Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 MTND4LP32-201ENST00000636111 270 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 MTND5P30-201ENST00000452896 1731 ntBASIC2.37□□□□□ -2.03
RTP3Q9BQQ7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 RNU6-933P-201ENST00000384424 107 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 SNORA64-201ENST00000384674 134 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 AL023284.1-201ENST00000403956 276 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 MIR1287-201ENST00000408492 90 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 RNU6-370P-201ENST00000411008 104 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 USP9YP30-201ENST00000430729 455 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 MICF-203ENST00000432679 129 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 RPL39P29-201ENST00000447779 157 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 PTP4A1P4-201ENST00000512479 322 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1016P-201ENST00000516689 94 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 MIR4498-201ENST00000577599 66 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 Z75746.1-201ENST00000440243 2080 ntBASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
RTP3Q9BQQ7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1059P-201ENST00000363752 98 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 SNORD32A-201ENST00000364805 84 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1222P-201ENST00000384615 107 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 MIR521-1-201ENST00000384902 87 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1050P-201ENST00000410388 107 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.595-201ENST00000410403 105 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 RNU2-23P-201ENST00000410545 195 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AP000275.1-201ENST00000411943 390 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 Z82205.1-201ENST00000428456 297 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 MTND3P9-201ENST00000429526 346 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AC007677.1-201ENST00000445757 515 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 U8.21-201ENST00000459536 136 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 RPL22P13-201ENST00000493291 347 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AC026782.1-201ENST00000512952 449 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AC109329.1-201ENST00000518744 317 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AP005902.1-201ENST00000521358 186 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 APOOP3-201ENST00000536787 586 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AL049779.4-201ENST00000604500 156 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 AL159153.1-201ENST00000619688 317 ntBASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.35□□□□□ -2.03
RTP3Q9BQQ7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC006026.1-201ENST00000444025 1803 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 RNU6-593P-201ENST00000364716 112 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 RNU6-43P-201ENST00000384302 107 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 SNORA67.3-201ENST00000384366 140 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1297P-201ENST00000384415 104 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.535-201ENST00000384612 99 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 RNA5SP112-201ENST00000515937 99 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 Y_RNA.670-201ENST00000516255 105 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 RNU6-1213P-201ENST00000517075 94 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 RNU1-104P-201ENST00000517280 175 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 MIR4446-201ENST00000578505 67 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC018462.2-201ENST00000605375 395 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC009318.2-201ENST00000610917 651 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC007792.1-201ENST00000623023 402 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 AC073544.1-201ENST00000600110 1595 ntBASIC2.34□□□□□ -2.03
RTP3Q9BQQ7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.34□□□□□ -2.04
RTP3Q9BQQ7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.34□□□□□ -2.04
RTP3Q9BQQ7 Z82195.2-201ENST00000612348 18351 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 RNU6-227P-201ENST00000362865 103 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 RNU6-486P-201ENST00000363116 107 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 RNU6-1285P-201ENST00000363480 105 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.259-201ENST00000364619 101 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 MIR218-1-201ENST00000384999 110 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 SNORA75.4-201ENST00000391278 119 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 Y_RNA.594-201ENST00000410373 140 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AC236972.2-201ENST00000434979 310 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 SNORD5.1-201ENST00000458800 75 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 RNU7-26P-201ENST00000458980 63 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 SNORD19B-201ENST00000459623 84 ntBASIC2.33□□□□□ -2.04
RTP3Q9BQQ7 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms