Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC069113.3-201ENST00000521019 150 ntBASIC-0.25□□□□□ -2.45
ABCA3Q99758 AC025678.1-201ENST00000567861 338 ntBASIC-0.25□□□□□ -2.45
ABCA3Q99758 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.25□□□□□ -2.45
ABCA3Q99758 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.26□□□□□ -2.45
ABCA3Q99758 SNORD116-20-201ENST00000384529 92 ntBASIC-0.26□□□□□ -2.45
ABCA3Q99758 MIR653-201ENST00000385279 96 ntBASIC-0.26□□□□□ -2.45
ABCA3Q99758 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.26□□□□□ -2.45
ABCA3Q99758 AC074198.2-201ENST00000508153 258 ntBASIC-0.26□□□□□ -2.45
ABCA3Q99758 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.26□□□□□ -2.45
ABCA3Q99758 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.26□□□□□ -2.45
ABCA3Q99758 AC008147.4-201ENST00000617570 1204 ntBASIC-0.26□□□□□ -2.45
ABCA3Q99758 RNU6-877P-201ENST00000383868 107 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 MIR520F-201ENST00000384824 87 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 MIR601-201ENST00000385256 79 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 AL606517.1-201ENST00000446914 387 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.27□□□□□ -2.45
ABCA3Q99758 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.27□□□□□ -2.45
ABCA3Q99758 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 RNU6-714P-201ENST00000516963 103 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.27□□□□□ -2.45
ABCA3Q99758 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.27□□□□□ -2.45
ABCA3Q99758 AL357080.1-201ENST00000617394 239 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 uc_338.34-201ENST00000617467 174 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 BX119904.4-201ENST00000424402 301 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 MTND1P20-201ENST00000430341 950 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 SNORA31.19-201ENST00000517079 126 ntBASIC-0.27□□□□□ -2.45
ABCA3Q99758 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
ABCA3Q99758 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-0.27□□□□□ -2.45
ABCA3Q99758 SNORA16.2-201ENST00000390991 127 ntBASIC-0.28□□□□□ -2.45
ABCA3Q99758 C1DP2-201ENST00000418167 426 ntBASIC-0.28□□□□□ -2.45
ABCA3Q99758 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.28□□□□□ -2.45
ABCA3Q99758 C1DP4-201ENST00000455429 424 ntBASIC-0.28□□□□□ -2.45
ABCA3Q99758 Y_RNA.654-201ENST00000497848 106 ntBASIC-0.28□□□□□ -2.45
ABCA3Q99758 SNORA31.3-201ENST00000516029 96 ntBASIC-0.28□□□□□ -2.45
ABCA3Q99758 AL357312.1-201ENST00000603879 298 ntBASIC-0.28□□□□□ -2.45
ABCA3Q99758 AP001033.2-201ENST00000609701 1003 ntBASIC-0.28□□□□□ -2.45
ABCA3Q99758 SNORA72.2-201ENST00000365028 127 ntBASIC-0.29□□□□□ -2.46
ABCA3Q99758 MIR217-201ENST00000384817 110 ntBASIC-0.29□□□□□ -2.46
ABCA3Q99758 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA3Q99758 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA3Q99758 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA3Q99758 HMGB1P29-201ENST00000505659 499 ntBASIC-0.29□□□□□ -2.46
ABCA3Q99758 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA3Q99758 AC027338.1-201ENST00000514840 825 ntBASIC-0.29□□□□□ -2.46
ABCA3Q99758 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA3Q99758 SNORA25.12-201ENST00000516202 82 ntBASIC-0.29□□□□□ -2.46
ABCA3Q99758 AC109446.1-201ENST00000566172 220 ntBASIC-0.29□□□□□ -2.46
ABCA3Q99758 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA3Q99758 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.29□□□□□ -2.46
ABCA3Q99758 RNU6-674P-201ENST00000363831 107 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 SNORA32.3-201ENST00000384772 121 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 AC104332.1-201ENST00000440471 797 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 RNU7-59P-201ENST00000459101 61 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.3□□□□□ -2.46
ABCA3Q99758 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.3□□□□□ -2.46
ABCA3Q99758 AC133794.1-201ENST00000602731 914 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 AL353778.1-201ENST00000603149 408 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 AP000676.3-201ENST00000623299 569 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 MIR224-201ENST00000384889 81 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.3□□□□□ -2.46
ABCA3Q99758 RPL39P36-201ENST00000490784 156 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 AC093534.1-201ENST00000504977 132 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 RNU6-863P-201ENST00000515989 104 ntBASIC-0.3□□□□□ -2.46
ABCA3Q99758 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.3□□□□□ -2.46
ABCA3Q99758 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.3□□□□□ -2.46
ABCA3Q99758 AC107982.1-201ENST00000507171 1300 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 RNU6-212P-201ENST00000362642 104 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 RNY4P24-201ENST00000362735 96 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 RNU6-72P-201ENST00000384285 79 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.31□□□□□ -2.46
ABCA3Q99758 AC013262.1-201ENST00000426710 252 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 TMEM251P1-201ENST00000503717 318 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.31□□□□□ -2.46
ABCA3Q99758 SNRPGP1-201ENST00000553864 222 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 AL353149.1-201ENST00000610667 244 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 AL079343.1-201ENST00000572358 1771 ntBASIC-0.31□□□□□ -2.46
ABCA3Q99758 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 RNU6-97P-201ENST00000363387 104 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 SNORD115-41-201ENST00000363608 82 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 MIR140-201ENST00000385282 100 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 SNORA12-201ENST00000391162 147 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 RNA5SP496-201ENST00000391240 109 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 MTND4P24-201ENST00000424002 397 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 SNRPEP8-201ENST00000442866 260 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.32□□□□□ -2.46
ABCA3Q99758 AC091874.1-201ENST00000511402 339 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC-0.32□□□□□ -2.46
ABCA3Q99758 RMST_10.1-201ENST00000616309 154 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 AC099654.9-201ENST00000637055 678 ntBASIC-0.32□□□□□ -2.46
ABCA3Q99758 MIR340-201ENST00000362125 95 ntBASIC-0.33□□□□□ -2.46
ABCA3Q99758 MIR103A2-201ENST00000362154 78 ntBASIC-0.33□□□□□ -2.46
ABCA3Q99758 RNU6-839P-201ENST00000363347 108 ntBASIC-0.33□□□□□ -2.46
ABCA3Q99758 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC-0.33□□□□□ -2.46
ABCA3Q99758 RPS26P42-201ENST00000413485 326 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms