Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-1256P-201ENST00000516539 103 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 RNU6-897P-201ENST00000517135 105 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 AL136363.2-201ENST00000604173 851 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 AL137246.1-201ENST00000607072 977 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 AC245008.1-201ENST00000608123 476 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 AC006441.5-201ENST00000612680 209 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 AC016597.2-201ENST00000613256 341 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 ANKRD26P2-201ENST00000445530 1710 ntBASIC-0.43□□□□□ -2.48
COL12A1Q99715 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 SNORA24.1-201ENST00000384401 135 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 MTND1P14-201ENST00000427400 950 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 MTATP6P16-201ENST00000434543 526 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 TIMM9P1-201ENST00000436122 256 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 MIR4306-201ENST00000583390 91 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AL139286.2-201ENST00000606838 396 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AC144521.1-201ENST00000607148 956 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 uc_338.28-201ENST00000612082 187 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 CASC19-280ENST00000642102 1351 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AL136310.1-201ENST00000404926 654 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AL139396.1-201ENST00000421137 167 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 DEFB130D-201ENST00000426866 237 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL12A1Q99715 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AC022868.1-201ENST00000517767 391 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL12A1Q99715 TRAV32-201ENST00000553993 340 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.44□□□□□ -2.48
COL12A1Q99715 POLR3GP2-201ENST00000588366 668 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 uc_338.19-201ENST00000616808 99 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 RNU6-650P-201ENST00000365658 111 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 RNU6-296P-201ENST00000384608 107 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 SNORA26.3-201ENST00000391119 136 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 MTND4P15-201ENST00000437913 1033 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.44□□□□□ -2.48
COL12A1Q99715 ELOCP24-201ENST00000456370 334 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 USP9YP25-201ENST00000457708 443 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AC104982.1-201ENST00000478775 574 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 RPL30P1-201ENST00000488676 339 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.44□□□□□ -2.48
COL12A1Q99715 MIR3139-201ENST00000579145 76 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 MTND1P15-201ENST00000579262 949 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AL158050.2-201ENST00000605336 568 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 AC242628.1-201ENST00000606810 391 ntBASIC-0.44□□□□□ -2.48
COL12A1Q99715 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
COL12A1Q99715 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC-0.45□□□□□ -2.48
COL12A1Q99715 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
COL12A1Q99715 RNU6-898P-201ENST00000365627 104 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 RNU1-39P-201ENST00000383897 165 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC-0.45□□□□□ -2.48
COL12A1Q99715 AL158050.1-201ENST00000416077 457 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 AL049734.2-201ENST00000441066 616 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 MTND1P17-201ENST00000448961 204 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 AC026421.1-201ENST00000519101 163 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 MIR548AD-201ENST00000584780 82 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.45□□□□□ -2.48
COL12A1Q99715 AL590491.3-201ENST00000610731 82 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 SNORA25.7-201ENST00000364375 127 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 SNORA48.1-201ENST00000390879 135 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 AL392003.1-201ENST00000434394 243 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 MTCO3P10-201ENST00000455912 772 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 RPL31P53-201ENST00000457065 348 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 RNU6-1095P-201ENST00000516148 108 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 MTCO2P15-201ENST00000532655 656 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC-0.45□□□□□ -2.48
COL12A1Q99715 AC091152.3-201ENST00000604227 325 ntBASIC-0.45□□□□□ -2.48
COL12A1Q99715 SNORA3B-201ENST00000391305 131 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC-0.46□□□□□ -2.48
COL12A1Q99715 AC011195.1-201ENST00000578177 177 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AL355816.2-201ENST00000610049 647 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AC011939.3-201ENST00000613686 466 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 SNORD32A-201ENST00000364805 84 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AL603865.2-201ENST00000401679 213 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL12A1Q99715 CALM2P2-201ENST00000428512 440 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL12A1Q99715 CECR9-201ENST00000453421 199 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AC079382.1-201ENST00000493346 557 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 RNU2-60P-201ENST00000517290 128 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AL353803.5-201ENST00000599815 141 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL12A1Q99715 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.46□□□□□ -2.48
COL12A1Q99715 AC098831.1-201ENST00000440661 216 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.46□□□□□ -2.48
COL12A1Q99715 RNU6-581P-201ENST00000516214 105 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AC027419.1-201ENST00000522976 328 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.46□□□□□ -2.48
COL12A1Q99715 AL670379.3-201ENST00000605040 251 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 UBE2Q2P6-201ENST00000612666 153 ntBASIC-0.46□□□□□ -2.48
COL12A1Q99715 RNA5SP259-201ENST00000365541 109 ntBASIC-0.47□□□□□ -2.48
COL12A1Q99715 MTND1P28-201ENST00000435623 950 ntBASIC-0.47□□□□□ -2.48
COL12A1Q99715 RAC1P7-201ENST00000445367 377 ntBASIC-0.47□□□□□ -2.48
COL12A1Q99715 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms