Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 snoU13.30-201ENST00000458951 104 ntBASIC2.6□□□□□ -1.99
NOTCH4Q99466 AP000873.1-201ENST00000463987 400 ntBASIC2.6□□□□□ -1.99
NOTCH4Q99466 AC103975.1-201ENST00000482506 483 ntBASIC2.6□□□□□ -1.99
NOTCH4Q99466 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
NOTCH4Q99466 AP000867.2-201ENST00000532468 320 ntBASIC2.6□□□□□ -1.99
NOTCH4Q99466 SNORD84-203ENST00000584275 78 ntBASIC2.6□□□□□ -1.99
NOTCH4Q99466 RPL23AP78-201ENST00000599928 470 ntBASIC2.6□□□□□ -1.99
NOTCH4Q99466 RPS29P30-201ENST00000600975 111 ntBASIC2.6□□□□□ -1.99
NOTCH4Q99466 AL645944.1-201ENST00000603857 493 ntBASIC2.6□□□□□ -1.99
NOTCH4Q99466 AC012531.5-201ENST00000611375 151 ntBASIC2.6□□□□□ -1.99
NOTCH4Q99466 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NOTCH4Q99466 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NOTCH4Q99466 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.6□□□□□ -1.99
NOTCH4Q99466 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NOTCH4Q99466 RNU6-1303P-201ENST00000364841 107 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
NOTCH4Q99466 RNU5E-9P-201ENST00000411164 104 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 AL592045.1-201ENST00000429867 352 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 NDUFB4P6-201ENST00000436819 366 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 AL138752.1-201ENST00000452964 351 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 RNU7-120P-201ENST00000459334 63 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 AC098869.1-201ENST00000481627 292 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 RPS15AP34-201ENST00000487776 387 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.59□□□□□ -1.99
NOTCH4Q99466 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.59□□□□□ -1.99
NOTCH4Q99466 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.59□□□□□ -1.99
NOTCH4Q99466 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NOTCH4Q99466 U2.14-201ENST00000615943 113 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 MIR7111-201ENST00000619751 72 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
NOTCH4Q99466 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NOTCH4Q99466 AC002546.1-201ENST00000588041 2504 ntBASIC2.59□□□□□ -1.99
NOTCH4Q99466 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.59□□□□□ -1.99
NOTCH4Q99466 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NOTCH4Q99466 Y_RNA.214-201ENST00000364201 112 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 Y_RNA.269-201ENST00000364685 89 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 RNU6-76P-201ENST00000384060 104 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 MIR135A2-201ENST00000384854 100 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 MIR521-1-201ENST00000384902 87 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.59□□□□□ -2
NOTCH4Q99466 AL445305.1-201ENST00000432577 575 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.59□□□□□ -2
NOTCH4Q99466 AC087588.1-201ENST00000462203 316 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 RPL23AP62-201ENST00000463396 453 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 HMGN2P13-201ENST00000476476 274 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 MRPL42P6-201ENST00000486397 371 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 RPL30P10-201ENST00000488148 337 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 RNU6-1012P-201ENST00000516606 109 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 CKS1BP7-201ENST00000522230 235 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 MIR3921-201ENST00000577308 85 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 MIR4644-201ENST00000579929 84 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 AP001485.1-201ENST00000604799 199 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 RPL23AP88-201ENST00000605759 454 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.59□□□□□ -2
NOTCH4Q99466 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.59□□□□□ -2
NOTCH4Q99466 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.59□□□□□ -2
NOTCH4Q99466 AC004925.1-201ENST00000624256 2706 ntBASIC2.59□□□□□ -2
NOTCH4Q99466 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
NOTCH4Q99466 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH4Q99466 Y_RNA.48-201ENST00000362710 103 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 Y_RNA.292-201ENST00000364904 97 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 RNU6-290P-201ENST00000365212 101 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 RNU6-1179P-201ENST00000384667 107 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 SNORA12.2-201ENST00000391040 156 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 RNA5SP247-201ENST00000411181 105 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.58□□□□□ -2
NOTCH4Q99466 AL117339.3-201ENST00000418733 162 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 AL356320.1-201ENST00000429616 163 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH4Q99466 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.58□□□□□ -2
NOTCH4Q99466 AC073901.1-201ENST00000462471 408 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 MRPS36P4-201ENST00000534436 298 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 AC136932.1-201ENST00000574771 208 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 AC002545.1-201ENST00000592511 181 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 AL162424.1-201ENST00000602325 221 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 SCARNA4-201ENST00000629045 128 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
NOTCH4Q99466 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NOTCH4Q99466 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.58□□□□□ -2
NOTCH4Q99466 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH4Q99466 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NOTCH4Q99466 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH4Q99466 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
NOTCH4Q99466 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
NOTCH4Q99466 RNU6-837P-201ENST00000391056 108 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 Y_RNA.602-201ENST00000410535 92 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 Y_RNA.623-201ENST00000411128 95 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 Y_RNA.629-201ENST00000411368 105 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 Z85995.1-201ENST00000415547 335 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.58□□□□□ -2
NOTCH4Q99466 AC124916.1-201ENST00000444020 547 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 UBL5P3-201ENST00000475112 231 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 AL359273.1-201ENST00000510918 627 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 RNU6-143P-201ENST00000516942 93 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.58□□□□□ -2
NOTCH4Q99466 AC104581.2-201ENST00000572227 430 ntBASIC2.58□□□□□ -2
NOTCH4Q99466 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.58□□□□□ -2
NOTCH4Q99466 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NOTCH4Q99466 MAPK10-322ENST00000641485 4530 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms