Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.85□□□□□ -2.11
RAB40CQ96S21 AC018638.8-201ENST00000588755 281 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 AC008749.1-201ENST00000597650 306 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 AC243960.4-201ENST00000600532 288 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 AC092794.1-201ENST00000612734 582 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 MIR6817-201ENST00000615588 66 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 AC091932.3-201ENST00000624223 323 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 MTND4P1-201ENST00000457501 1466 ntBASIC1.85□□□□□ -2.11
RAB40CQ96S21 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RAB40CQ96S21 AC009487.4-201ENST00000624969 3585 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 AL359851.1-201ENST00000569460 4997 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 Y_RNA.86-201ENST00000363020 111 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 RNU6-784P-201ENST00000384330 106 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 Y_RNA.510-201ENST00000384511 114 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 RNU6-1093P-201ENST00000391194 107 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 RNA5SP494-201ENST00000410653 129 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 AL139413.1-201ENST00000421309 217 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 RPS15AP28-201ENST00000435088 386 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.84□□□□□ -2.11
RAB40CQ96S21 AL353572.1-201ENST00000442490 417 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 FGF7P6-202ENST00000451282 293 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.84□□□□□ -2.11
RAB40CQ96S21 AC010486.1-201ENST00000511793 424 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 RNA5SP148-201ENST00000516527 94 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 RNA5SP490-201ENST00000517141 136 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.84□□□□□ -2.11
RAB40CQ96S21 AF235103.2-201ENST00000525753 346 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.84□□□□□ -2.11
RAB40CQ96S21 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.84□□□□□ -2.11
RAB40CQ96S21 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.84□□□□□ -2.11
RAB40CQ96S21 POLR3GP2-201ENST00000588366 668 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 AC009994.1-201ENST00000606889 253 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 AC084782.3-201ENST00000612282 578 ntBASIC1.84□□□□□ -2.11
RAB40CQ96S21 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RAB40CQ96S21 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40CQ96S21 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.83□□□□□ -2.12
RAB40CQ96S21 DAP3P1-201ENST00000441522 278 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 RPL23AP6-201ENST00000446637 472 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 AL353705.4-201ENST00000449661 238 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 SNORA59A-201ENST00000459326 152 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 AC005741.1-201ENST00000511094 432 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.83□□□□□ -2.12
RAB40CQ96S21 RNU4-49P-201ENST00000516080 140 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 RNU1-40P-201ENST00000516816 164 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 RNU6-1088P-201ENST00000516850 104 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 RNU1-97P-201ENST00000516872 164 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40CQ96S21 AC021269.2-201ENST00000532318 330 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.83□□□□□ -2.12
RAB40CQ96S21 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40CQ96S21 AC090517.1-201ENST00000569307 266 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 AC060780.3-201ENST00000589464 80 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.83□□□□□ -2.12
RAB40CQ96S21 BNIP3P10-201ENST00000605360 577 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 AC103810.6-201ENST00000606708 136 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
RAB40CQ96S21 AL773524.1-201ENST00000614065 229 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 AL160394.1-201ENST00000624765 724 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RAB40CQ96S21 KPNA2P1-201ENST00000458289 1591 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 AC233981.2-201ENST00000611524 1614 ntBASIC1.83□□□□□ -2.12
RAB40CQ96S21 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RAB40CQ96S21 RNU5B-2P-201ENST00000363036 113 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 Y_RNA.99-201ENST00000363138 105 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 MIR518C-201ENST00000384822 101 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 RNU2-41P-201ENST00000410991 178 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.82□□□□□ -2.12
RAB40CQ96S21 MTND1P23-201ENST00000416931 372 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 MTATP6P13-201ENST00000438531 667 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.82□□□□□ -2.12
RAB40CQ96S21 AL513124.1-201ENST00000450410 614 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 HMGN2P18-201ENST00000450680 270 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.82□□□□□ -2.12
RAB40CQ96S21 ACA59.1-201ENST00000515966 143 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 RNU6-358P-201ENST00000516564 75 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.82□□□□□ -2.12
RAB40CQ96S21 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.82□□□□□ -2.12
RAB40CQ96S21 AC006023.1-201ENST00000603944 259 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 AC124303.1-201ENST00000605703 360 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 AC025754.2-201ENST00000606491 432 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 AC019193.3-201ENST00000609144 554 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.82□□□□□ -2.12
RAB40CQ96S21 AC005296.1-201ENST00000616145 209 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 AC009248.2-201ENST00000619826 254 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 MIR6852-201ENST00000621699 66 ntBASIC1.82□□□□□ -2.12
RAB40CQ96S21 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.82□□□□□ -2.12
RAB40CQ96S21 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.82□□□□□ -2.12
RAB40CQ96S21 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 RNU6-306P-201ENST00000384617 107 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 MIR1283-2-201ENST00000408621 87 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 AC244636.1-201ENST00000421152 228 ntBASIC1.81□□□□□ -2.12
RAB40CQ96S21 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.81□□□□□ -2.12
RAB40CQ96S21 AC025033.1-201ENST00000463883 194 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms