Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC073648.5-201ENST00000603502 305 ntBASIC1.39□□□□□ -2.19
COL21A1Q96P44 AL078603.1-201ENST00000603824 313 ntBASIC1.39□□□□□ -2.19
COL21A1Q96P44 Z99129.1-201ENST00000612510 255 ntBASIC1.39□□□□□ -2.19
COL21A1Q96P44 AC063943.3-201ENST00000615562 356 ntBASIC1.39□□□□□ -2.19
COL21A1Q96P44 AC072046.2-201ENST00000618366 268 ntBASIC1.39□□□□□ -2.19
COL21A1Q96P44 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.39□□□□□ -2.19
COL21A1Q96P44 SNORD98-201ENST00000636377 67 ntBASIC1.39□□□□□ -2.19
COL21A1Q96P44 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.39□□□□□ -2.19
COL21A1Q96P44 RNU6-37P-201ENST00000362692 107 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU6-11P-201ENST00000364234 107 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 Y_RNA.332-201ENST00000365271 113 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU6-25P-201ENST00000383873 107 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU6-1029P-201ENST00000384109 107 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU6-48P-201ENST00000384161 107 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU6-16P-201ENST00000384385 107 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU6-15P-201ENST00000384534 107 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU6-29P-201ENST00000384637 107 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 MIR1-2-201ENST00000384961 85 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 MTCYBP2-201ENST00000407745 171 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU2-66P-201ENST00000410650 161 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.38□□□□□ -2.19
COL21A1Q96P44 NCOR1P3-201ENST00000420479 303 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC244670.1-201ENST00000436879 112 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 MTCO2P7-201ENST00000446518 666 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 MTND1P18-201ENST00000448191 573 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC132479.1-201ENST00000449160 144 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 HSPE1P24-201ENST00000450782 238 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU6-567P-201ENST00000516746 107 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC069113.1-201ENST00000517763 267 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.38□□□□□ -2.19
COL21A1Q96P44 MIR4703-201ENST00000577728 79 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 MIR4285-201ENST00000581001 85 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 Z84480.1-201ENST00000605131 311 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC064807.4-201ENST00000607201 407 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.38□□□□□ -2.19
COL21A1Q96P44 MIR6504-201ENST00000613520 61 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC136475.10-201ENST00000620253 385 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 MIR6734-201ENST00000621166 68 ntBASIC1.38□□□□□ -2.19
COL21A1Q96P44 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.38□□□□□ -2.19
COL21A1Q96P44 RNU4-15P-201ENST00000362613 141 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 Y_RNA.159-201ENST00000363674 87 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 RNU6-743P-201ENST00000364151 106 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 RNU6-456P-201ENST00000384493 107 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 Y_RNA.582-201ENST00000391023 95 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 SNORA26.3-201ENST00000391119 136 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 MIR1276-201ENST00000408707 83 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 RNU2-29P-201ENST00000410423 189 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 RNU2-16P-201ENST00000410712 136 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 RNU6-293P-201ENST00000411259 106 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC010975.2-201ENST00000427781 588 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.37□□□□□ -2.19
COL21A1Q96P44 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.37□□□□□ -2.19
COL21A1Q96P44 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC091133.4-201ENST00000511142 308 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC105417.1-201ENST00000514691 285 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 SUB1P2-201ENST00000556401 297 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC015720.1-201ENST00000565251 277 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC068790.2-201ENST00000602601 557 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 AL645939.4-201ENST00000604495 135 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC104073.3-201ENST00000610942 955 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 MIR7974-201ENST00000615835 79 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC009161.2-201ENST00000624626 138 ntBASIC1.37□□□□□ -2.19
COL21A1Q96P44 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.37□□□□□ -2.19
COL21A1Q96P44 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.37□□□□□ -2.19
COL21A1Q96P44 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL21A1Q96P44 LINC02555-201ENST00000563933 1951 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 RNA5SP493-201ENST00000364115 91 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 Y_RNA.399-201ENST00000383955 105 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 RNU6-259P-201ENST00000383999 107 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 RNU6-43P-201ENST00000384302 107 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AP000275.1-201ENST00000411943 390 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 AC123900.1-201ENST00000420390 96 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AL354695.1-201ENST00000427935 228 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AC002486.1-201ENST00000435098 391 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 PRPS1P1-201ENST00000445305 876 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 AL162395.1-201ENST00000457882 422 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 RPS3AP17-201ENST00000472594 777 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AC145146.1-201ENST00000496370 254 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 AC108078.1-201ENST00000508073 725 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 FAM206BP-201ENST00000510179 541 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 MIR449C-201ENST00000516047 92 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 DNAJC19P9-201ENST00000555084 351 ntBASIC1.36□□□□□ -2.19
COL21A1Q96P44 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.36□□□□□ -2.19
COL21A1Q96P44 MIR3169-201ENST00000578032 83 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms