Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL451074.5-201ENST00000415894 435 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS50Q96JG6 RPL36AP48-201ENST00000485521 314 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 RNU7-175P-201ENST00000515915 61 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 RNU5F-2P-201ENST00000516066 82 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.84□□□□□ -1.95
VPS50Q96JG6 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS50Q96JG6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.84□□□□□ -1.95
VPS50Q96JG6 AC105137.2-201ENST00000569073 466 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.84□□□□□ -1.95
VPS50Q96JG6 RPL12P50-201ENST00000603116 116 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 AC006386.2-201ENST00000624491 75 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 AC012005.1-201ENST00000624575 75 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 FO624990.1-201ENST00000636373 85 ntBASIC2.84□□□□□ -1.95
VPS50Q96JG6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.84□□□□□ -1.96
VPS50Q96JG6 AL035425.3-201ENST00000564206 4996 ntBASIC2.84□□□□□ -1.96
VPS50Q96JG6 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.84□□□□□ -1.96
VPS50Q96JG6 RNU6-222P-201ENST00000362438 107 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 Y_RNA.39-201ENST00000362620 98 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 RNU6-1010P-201ENST00000362757 107 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 Y_RNA.106-201ENST00000363189 100 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 RNU6-450P-201ENST00000364654 107 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 RNU6-708P-201ENST00000384217 107 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 SNORA44-201ENST00000384584 132 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 MIR186-201ENST00000384988 86 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 EEF1A1P41-201ENST00000414667 207 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AIMP1P2-201ENST00000425294 312 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AC078809.1-201ENST00000427601 140 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS50Q96JG6 RPS15AP7-201ENST00000439294 405 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AC107083.1-201ENST00000439643 279 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 RNU7-87P-201ENST00000459343 62 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AIG1P1-201ENST00000503376 148 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.83□□□□□ -1.96
VPS50Q96JG6 SCGB1D5P-201ENST00000515134 247 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 RNU7-4P-201ENST00000516961 62 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.83□□□□□ -1.96
VPS50Q96JG6 HSBP1P1-201ENST00000555205 166 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AC006600.1-201ENST00000572529 153 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.83□□□□□ -1.96
VPS50Q96JG6 MIR5188-201ENST00000583467 113 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 ELOCP29-201ENST00000588193 334 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AC096772.1-201ENST00000609146 564 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 uc_338.14-201ENST00000613162 166 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AL132822.1-201ENST00000617063 513 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AL137790.1-201ENST00000634283 177 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 SNORD98-201ENST00000636377 67 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 AC096644.4-201ENST00000563417 2912 ntBASIC2.83□□□□□ -1.96
VPS50Q96JG6 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS50Q96JG6 AC135776.4-201ENST00000624300 1904 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS50Q96JG6 SNORA9.2-201ENST00000365361 133 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 Y_RNA.358-201ENST00000365491 99 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 RNU6-142P-201ENST00000384019 107 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 SNORD67-201ENST00000390833 111 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 SNORA26.3-201ENST00000391119 136 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 RNU6-985P-201ENST00000410182 104 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS50Q96JG6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.82□□□□□ -1.96
VPS50Q96JG6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS50Q96JG6 RN7SL297P-201ENST00000483161 293 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 RPL22P13-201ENST00000493291 347 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.82□□□□□ -1.96
VPS50Q96JG6 Y_RNA.706-201ENST00000516933 99 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS50Q96JG6 COX6CP5-201ENST00000527162 228 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 AC079598.5-201ENST00000547460 117 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.82□□□□□ -1.96
VPS50Q96JG6 Z98751.3-201ENST00000604447 521 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 AC100812.1-201ENST00000607622 580 ntBASIC2.82□□□□□ -1.96
VPS50Q96JG6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.82□□□□□ -1.96
VPS50Q96JG6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
VPS50Q96JG6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
VPS50Q96JG6 AC092268.1-201ENST00000342691 405 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.81□□□□□ -1.96
VPS50Q96JG6 Y_RNA.145-201ENST00000363527 102 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 SNORA68.1-201ENST00000364537 132 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 RNU6-26P-201ENST00000383985 107 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 RNU6-17P-201ENST00000384245 107 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 Y_RNA.459-201ENST00000384251 102 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 U8.10-201ENST00000384260 133 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 RNU6-18P-201ENST00000384527 107 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 MIR549A-201ENST00000385268 96 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 SNORA69.1-201ENST00000390904 137 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 Y_RNA.592-201ENST00000410274 109 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 CYCSP48-201ENST00000417124 323 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 AL445305.1-201ENST00000432577 575 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 AC112492.4-201ENST00000456549 352 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS50Q96JG6 GNAI2P1-201ENST00000541815 315 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 EIF4BP1-201ENST00000554881 351 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS50Q96JG6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS50Q96JG6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.81□□□□□ -1.96
VPS50Q96JG6 AC073410.2-201ENST00000603240 332 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 7SK.7-201ENST00000603504 247 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 AC136443.5-201ENST00000603741 370 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 U2.1-201ENST00000618978 145 ntBASIC2.81□□□□□ -1.96
VPS50Q96JG6 MTND5P16-201ENST00000460269 1703 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 514.9 ms