Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 RNU6-662P-201ENST00000384253 104 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 RNU6-318P-201ENST00000384283 103 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 RNU6-658P-201ENST00000384606 106 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 MIR487A-201ENST00000385009 80 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 Y_RNA.602-201ENST00000410535 92 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 AC243964.1-201ENST00000441814 261 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 HSPE1P25-201ENST00000455484 251 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 Y_RNA.644-201ENST00000459006 113 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 Y_RNA.674-201ENST00000516362 113 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 SCARNA24.2-201ENST00000516968 130 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX11Q96FC9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.68□□□□□ -1.82
DDX11Q96FC9 RPL23AP88-201ENST00000605759 454 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.68□□□□□ -1.82
DDX11Q96FC9 FTX_3.1-201ENST00000610451 147 ntBASIC3.68□□□□□ -1.82
DDX11Q96FC9 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
DDX11Q96FC9 AC009541.1-201ENST00000438279 2662 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
DDX11Q96FC9 SNORD115-32-201ENST00000364079 82 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 RNU6-290P-201ENST00000365212 101 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 RNU6-217P-201ENST00000384164 104 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 RNA5SP213-201ENST00000391031 106 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 AL353705.1-201ENST00000433468 480 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 AL512844.2-201ENST00000433990 593 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 AC009296.1-201ENST00000443146 155 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 RNU6-1282P-201ENST00000516735 96 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 MIR4506-201ENST00000584693 77 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 AC024153.1-201ENST00000603103 365 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.67□□□□□ -1.82
DDX11Q96FC9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.67□□□□□ -1.82
DDX11Q96FC9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
DDX11Q96FC9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX11Q96FC9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
DDX11Q96FC9 RNU6-545P-201ENST00000362681 104 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
DDX11Q96FC9 MTCO2P33-201ENST00000402100 465 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX11Q96FC9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 EIF1P2-201ENST00000428233 350 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 RNU7-120P-201ENST00000459334 63 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.66□□□□□ -1.82
DDX11Q96FC9 RN7SKP272-201ENST00000516988 232 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 UBL5P2-201ENST00000583788 219 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 HSPE1P7-201ENST00000604681 321 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.66□□□□□ -1.82
DDX11Q96FC9 RMST_6.1-201ENST00000611980 203 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 MIR6852-201ENST00000621699 66 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 SNORA43.4-201ENST00000629559 138 ntBASIC3.66□□□□□ -1.82
DDX11Q96FC9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.66□□□□□ -1.82
DDX11Q96FC9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
DDX11Q96FC9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
DDX11Q96FC9 MIR411-201ENST00000362239 96 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 RNU4-90P-201ENST00000362773 141 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 Y_RNA.76-201ENST00000362931 109 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 SNORD32A-201ENST00000364805 84 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 RNU6-1286P-201ENST00000383871 107 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 RNU6-926P-201ENST00000384075 107 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 RNU6-968P-201ENST00000384076 107 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
DDX11Q96FC9 RPL21P3-201ENST00000395517 478 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 Y_RNA.793-201ENST00000411222 111 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.65□□□□□ -1.83
DDX11Q96FC9 AC124916.1-201ENST00000444020 547 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 AC016700.2-201ENST00000446011 156 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 AC146507.2-201ENST00000460608 476 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 AP000870.1-201ENST00000472927 406 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX11Q96FC9 AC008885.1-201ENST00000514930 301 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.65□□□□□ -1.83
DDX11Q96FC9 MIR3910-1-201ENST00000580936 111 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.65□□□□□ -1.83
DDX11Q96FC9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
DDX11Q96FC9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
DDX11Q96FC9 AC022336.2-201ENST00000568966 2538 ntBASIC3.65□□□□□ -1.83
DDX11Q96FC9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
DDX11Q96FC9 RNA5SP361-201ENST00000362686 118 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 RNU6-527P-201ENST00000363425 104 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 Y_RNA.199-201ENST00000364014 102 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 SNORA7.4-201ENST00000384249 137 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 RNU6-378P-201ENST00000384324 107 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 RNU1-139P-201ENST00000391307 165 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX11Q96FC9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.64□□□□□ -1.83
DDX11Q96FC9 RPL23AP49-201ENST00000492925 468 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 RNA5SP385-201ENST00000515947 110 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 RNU6-255P-201ENST00000516957 105 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 AP004607.1-201ENST00000524456 203 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 LINC00933-203ENST00000559812 219 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.64□□□□□ -1.83
DDX11Q96FC9 AC093732.2-201ENST00000607950 274 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 AL137790.1-201ENST00000634283 177 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
DDX11Q96FC9 AL079305.1-201ENST00000623159 3008 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 AC008264.2-201ENST00000610193 3731 ntBASIC3.64□□□□□ -1.83
DDX11Q96FC9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.63□□□□□ -1.83
DDX11Q96FC9 SNORA80A-201ENST00000363922 136 ntBASIC3.63□□□□□ -1.83
DDX11Q96FC9 SNORA14A-201ENST00000364773 135 ntBASIC3.63□□□□□ -1.83
DDX11Q96FC9 Y_RNA.286-201ENST00000364813 102 ntBASIC3.63□□□□□ -1.83
DDX11Q96FC9 RNU1-73P-201ENST00000383971 164 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms