Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RNU1-139P-201ENST00000391307 165 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 NDUFB4P4-201ENST00000404822 243 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 RPS26P42-201ENST00000413485 326 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 snoU13.6-201ENST00000458785 104 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 RNA5SP112-201ENST00000515937 99 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 RNU6-58P-201ENST00000517143 103 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 AP002770.2-201ENST00000543613 532 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 AL034555.1-201ENST00000604816 211 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 AL162274.2-201ENST00000614406 332 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 AC005296.1-201ENST00000616145 209 ntBASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.78□□□□□ -1.96
CTHRC1Q96CG8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
CTHRC1Q96CG8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 RNU6-222P-201ENST00000362438 107 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 RNU6-280P-201ENST00000364145 104 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 U8.10-201ENST00000384260 133 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 RNY3P4-201ENST00000384428 101 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.574-201ENST00000384766 95 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 MIR887-201ENST00000401258 79 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 MIR320B2-201ENST00000408479 138 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 WARS2P1-201ENST00000429678 537 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 RPS29P12-201ENST00000460178 152 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 RPL31P41-201ENST00000477967 372 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 MRPS36P2-201ENST00000512569 299 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 RNU6-1143P-201ENST00000516125 104 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 RNU2-53P-201ENST00000516257 147 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 SNORA40.15-201ENST00000516884 107 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.713-201ENST00000517013 96 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 AL121655.1-201ENST00000605811 308 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 AC002064.3-201ENST00000623448 346 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 AC008264.2-201ENST00000610193 3731 ntBASIC2.77□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.40-201ENST00000362645 93 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 SNORD115-8-201ENST00000363856 82 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 SNORD115-38-201ENST00000365037 82 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 RNU6-159P-201ENST00000391080 106 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 RNU6-1093P-201ENST00000391194 107 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 MIR208B-201ENST00000401172 77 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 CBX3P9-201ENST00000402326 552 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AIMP1P2-201ENST00000425294 312 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 EIF1P2-201ENST00000428233 350 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 U8.22-201ENST00000459141 133 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AL121594.1-201ENST00000475906 575 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AC010655.3-201ENST00000478818 450 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 SEM1P1-201ENST00000506694 209 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 SNORA31.6-201ENST00000516241 130 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 SCARNA11.3-201ENST00000517276 130 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AC034114.1-201ENST00000520293 285 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 COX6CP5-201ENST00000527162 228 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AC027288.2-201ENST00000553028 243 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AC103810.1-201ENST00000579873 453 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AC008739.2-201ENST00000597006 317 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.76□□□□□ -1.97
CTHRC1Q96CG8 AP003122.5-201ENST00000527668 3766 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 RNU6-1301P-201ENST00000362724 104 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 RNU6-486P-201ENST00000363116 107 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 Y_RNA.276-201ENST00000364732 109 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 RNU6-708P-201ENST00000384217 107 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 AL512633.1-201ENST00000399931 655 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 RPS15AP7-201ENST00000439294 405 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 AP000705.1-201ENST00000454567 350 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 RPS3P1-201ENST00000456781 192 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 SNORA25.11-201ENST00000515935 105 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 AC027176.1-201ENST00000560204 514 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 MIR5695-201ENST00000579717 85 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 AL356575.1-201ENST00000603008 283 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 AL670379.2-201ENST00000604983 252 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 AC093732.2-201ENST00000607950 274 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 AC005520.5-201ENST00000613926 164 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.75□□□□□ -1.97
CTHRC1Q96CG8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 AC026241.1-201ENST00000517873 2142 ntBASIC2.74□□□□□ -1.97
CTHRC1Q96CG8 U8.9-201ENST00000365667 134 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms