Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 7SK.8-201ENST00000612110 250 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 7SK.11-201ENST00000615477 250 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 AP000484.1-201ENST00000620067 1252 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 7SK.13-201ENST00000622040 250 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 MIR1246-201ENST00000636535 73 ntBASIC0.24□□□□□ -2.37
TTC28Q96AY4 MIR335-201ENST00000362173 94 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 U3.8-201ENST00000363675 217 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 Y_RNA.439-201ENST00000384119 94 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AL133475.1-201ENST00000404414 305 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.23□□□□□ -2.37
TTC28Q96AY4 MTATP6P23-201ENST00000440153 476 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 RPL31P3-201ENST00000458430 332 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 RPS26P45-201ENST00000471748 340 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
TTC28Q96AY4 RNU2-53P-201ENST00000516257 147 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.23□□□□□ -2.37
TTC28Q96AY4 AP001189.2-201ENST00000527320 189 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AP000763.2-201ENST00000540641 163 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 TRAV32-201ENST00000553993 340 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AL157871.3-201ENST00000557231 293 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 MIR4645-201ENST00000583158 77 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AC021171.1-201ENST00000603137 706 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AC007363.1-201ENST00000604736 620 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.23□□□□□ -2.37
TTC28Q96AY4 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
TTC28Q96AY4 RNA5SP361-201ENST00000362686 118 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 Y_RNA.443-201ENST00000384135 111 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 RNU6-1065P-201ENST00000384513 106 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 CBX3P9-201ENST00000402326 552 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 ARL5AP1-201ENST00000418991 388 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.23□□□□□ -2.37
TTC28Q96AY4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.23□□□□□ -2.37
TTC28Q96AY4 AC005094.1-201ENST00000440420 368 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AC007969.2-201ENST00000441891 191 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.23□□□□□ -2.37
TTC28Q96AY4 OR2AQ1P-201ENST00000451972 200 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.23□□□□□ -2.37
TTC28Q96AY4 AP000797.1-201ENST00000478870 387 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 ACA64.5-201ENST00000516207 127 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 RNA5SP503-201ENST00000517047 117 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 DEFB131D-201ENST00000526803 184 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AC122134.1-202ENST00000569111 1201 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.23□□□□□ -2.37
TTC28Q96AY4 AC022022.2-201ENST00000602989 360 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 BNIP3P9-201ENST00000603714 553 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 MIR3529-201ENST00000637713 78 ntBASIC0.23□□□□□ -2.37
TTC28Q96AY4 RNU6-655P-201ENST00000362858 107 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 Y_RNA.99-201ENST00000363138 105 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 Y_RNA.436-201ENST00000384097 102 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 MIR605-201ENST00000385078 83 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 RPL21P111-201ENST00000418453 477 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 snoU13.14-201ENST00000459372 104 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC079140.3-201ENST00000511111 550 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 PSMC1P5-201ENST00000512850 177 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 RNA5SP255-201ENST00000516370 107 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC091489.2-201ENST00000566263 604 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 EIF1P4-201ENST00000572664 335 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 MIR3139-201ENST00000579145 76 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC087685.1-201ENST00000587507 141 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC091805.2-201ENST00000603848 235 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 MIR3976-201ENST00000606807 139 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
TTC28Q96AY4 Y_RNA.49-201ENST00000362714 112 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 RNU6-1284P-201ENST00000363701 100 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 RNU4-9P-201ENST00000364951 139 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 RNU4-12P-201ENST00000365233 139 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 RNU6-744P-201ENST00000365557 107 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 RNU6-1316P-201ENST00000384242 108 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 Y_RNA.497-201ENST00000384447 98 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AL359704.1-201ENST00000411586 781 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 TIMM9P2-201ENST00000419324 266 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AL627311.1-201ENST00000431514 115 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 U8.21-201ENST00000459536 136 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 TRBVA-201ENST00000498804 316 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 RNU5F-2P-201ENST00000516066 82 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 RNA5SP272-201ENST00000516095 111 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 MTCO3P15-201ENST00000526563 574 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC007751.1-201ENST00000529260 376 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 HIGD1AP17-201ENST00000554576 276 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 BNIP3P39-201ENST00000601077 554 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 OR4H6P-202ENST00000603819 340 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC104985.3-201ENST00000623479 597 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 AC100810.6-201ENST00000638068 285 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 MIR371B-201ENST00000638082 66 ntBASIC0.22□□□□□ -2.37
TTC28Q96AY4 Y_RNA.71-201ENST00000362892 104 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 RNU6-1210P-201ENST00000363775 107 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 RNU6-289P-201ENST00000364093 107 ntBASIC0.21□□□□□ -2.38
TTC28Q96AY4 RNU6-654P-201ENST00000364373 107 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms