Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RPS29P27-201ENST00000463711 170 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AC083904.1-201ENST00000487828 231 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 ATP5EP1-201ENST00000510257 156 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AC069113.1-201ENST00000517763 267 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AC115990.1-201ENST00000526957 301 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AC024909.2-201ENST00000553035 286 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AL512360.1-201ENST00000555346 234 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 VN1R107P-201ENST00000601784 209 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AC025754.2-201ENST00000606491 432 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AL357078.3-201ENST00000607528 618 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 AC005858.4-201ENST00000623191 700 ntBASIC1.29□□□□□ -2.2
RTN4IP1Q8WWV3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 SNORD114-6-201ENST00000364393 72 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 Y_RNA.318-201ENST00000365131 97 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 RNA5SP190-201ENST00000365222 118 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 SNORA12.2-201ENST00000391040 156 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 RNA5SP201-201ENST00000410316 124 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 RN7SKP61-201ENST00000410642 295 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 MTND3P9-201ENST00000429526 346 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AL133396.1-201ENST00000432048 687 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 snoU13.6-201ENST00000458785 104 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AC005741.1-201ENST00000511094 432 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AC092436.3-201ENST00000511788 257 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AC010525.2-201ENST00000590920 195 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 AC116312.1-201ENST00000606841 314 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 FAM157A-202ENST00000615155 405 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RTN4IP1Q8WWV3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 MIR340-201ENST00000362125 95 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 MIR126-201ENST00000362291 85 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 Y_RNA.38-201ENST00000362617 102 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-1317P-201ENST00000364582 104 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-142P-201ENST00000384019 107 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 MIR549A-201ENST00000385268 96 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 RNU11-3P-201ENST00000391111 133 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 SNORA26.3-201ENST00000391119 136 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 MTCYBP2-201ENST00000407745 171 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-908P-201ENST00000410160 94 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 RNU2-41P-201ENST00000410991 178 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 AP000275.1-201ENST00000411943 390 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 AC007098.1-201ENST00000420122 367 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 CBX3P6-201ENST00000430257 527 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 MRPS10P2-201ENST00000431226 381 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 MTCO2P3-201ENST00000442543 421 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 HMGN2P18-201ENST00000450680 270 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 AMD1P1-201ENST00000457220 922 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 Y_RNA.654-201ENST00000497848 106 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 AC022447.4-201ENST00000504053 364 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 SNORA19.2-201ENST00000516013 114 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 SNORD60.2-201ENST00000516883 86 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-612P-201ENST00000516909 102 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-548P-201ENST00000517083 115 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 AC245505.1-201ENST00000556398 224 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 AC109446.1-201ENST00000566172 220 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 MIR4713-201ENST00000582691 75 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 Z98751.3-201ENST00000604447 521 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-89P-201ENST00000606519 100 ntBASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.27□□□□□ -2.21
RTN4IP1Q8WWV3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 OR4G1P-203ENST00000641984 1631 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-1252P-201ENST00000363054 104 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-82P-201ENST00000363970 107 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 RNU1-42P-201ENST00000364033 160 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 RNU6-1329P-201ENST00000365664 107 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 MIR1304-201ENST00000408243 91 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 Y_RNA.615-201ENST00000410769 117 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 RNA5SP501-201ENST00000410990 112 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 RN7SKP284-201ENST00000411002 343 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 SRIP3-201ENST00000413200 219 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 AL590556.1-201ENST00000423231 483 ntBASIC1.26□□□□□ -2.21
RTN4IP1Q8WWV3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms