Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 UBE2V1P10-201ENST00000414685 269 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AC010975.2-201ENST00000427781 588 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 RPS27P21-201ENST00000486977 252 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 Y_RNA.704-201ENST00000516851 102 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AC083806.3-201ENST00000614016 455 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 uc_338.34-201ENST00000617467 174 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AC024581.2-201ENST00000619986 252 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AL162373.1-201ENST00000620433 407 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AC097372.5-201ENST00000623665 376 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 AP000648.3-201ENST00000623539 4507 ntBASIC1.33□□□□□ -2.2
SHROOM3Q8TF72 RNU6-1080P-201ENST00000383982 107 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 RAP1BP3-201ENST00000407180 549 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 CYCSP33-201ENST00000414485 327 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AL121601.2-201ENST00000438019 707 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 HMGN2P10-201ENST00000448085 265 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC087884.1-201ENST00000469738 328 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 CYCSP27-201ENST00000527643 293 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AL137161.1-201ENST00000532231 390 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC023050.3-201ENST00000541142 333 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AL021997.1-201ENST00000605757 193 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 RNU6-428P-201ENST00000362942 107 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 RNU6-529P-201ENST00000363383 104 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 RNU6-105P-201ENST00000363909 104 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 RNU6-715P-201ENST00000365204 103 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 SNORA46.1-201ENST00000391069 153 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 ARL5AP1-201ENST00000418991 388 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AL669831.1-202ENST00000428504 417 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 RPS15AP10-201ENST00000432472 382 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 GTF2IP13-201ENST00000438487 386 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AL121769.1-201ENST00000469473 401 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC083798.1-201ENST00000472671 131 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC083904.1-201ENST00000487828 231 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 MTCYBP40-201ENST00000509390 1135 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC092747.3-201ENST00000603769 301 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC138627.2-201ENST00000624202 601 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 AC091895.1-201ENST00000624494 256 ntBASIC1.32□□□□□ -2.2
SHROOM3Q8TF72 MTND4P14-201ENST00000435799 1354 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 RNU6-527P-201ENST00000363425 104 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 Y_RNA.251-201ENST00000364551 99 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 Y_RNA.372-201ENST00000365599 102 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 RNU6-877P-201ENST00000383868 107 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 MIR513A1-201ENST00000385138 129 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 SNORA16.2-201ENST00000390991 127 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 RNA5SP465-201ENST00000391195 109 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 SNORD56-201ENST00000413522 71 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC000111.3-201ENST00000433478 193 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC243964.1-201ENST00000441814 261 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 SCARNA18-201ENST00000459004 134 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 RNU6-1208P-201ENST00000459588 107 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AP001025.1-201ENST00000486139 332 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 RPL39P5-202ENST00000512505 151 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 RNU6-1281P-201ENST00000516223 105 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 RNU6-1038P-201ENST00000516516 104 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 SNORA31.18-201ENST00000517043 134 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AL157687.1-201ENST00000554853 619 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC021231.3-201ENST00000558497 370 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC025678.1-201ENST00000567861 338 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 AC098679.4-201ENST00000624241 654 ntBASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
SHROOM3Q8TF72 SNORD56.1-201ENST00000362913 68 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 SNORD113-7-201ENST00000363762 77 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 U6atac.2-201ENST00000408644 118 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 MTCO3P18-201ENST00000440206 761 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 U8.21-201ENST00000459536 136 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AP001324.2-201ENST00000461163 319 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC008628.2-201ENST00000502605 298 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC116655.1-201ENST00000508324 901 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 RNU6-718P-201ENST00000516166 105 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC087854.1-201ENST00000519706 414 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AL118558.2-201ENST00000556294 238 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AL133241.1-201ENST00000556832 487 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 RN7SL793P-201ENST00000583259 296 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC021646.1-201ENST00000605469 484 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 AC104458.1-201ENST00000608243 463 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 RMST_3.1-201ENST00000611651 109 ntBASIC1.3□□□□□ -2.2
SHROOM3Q8TF72 Z69720.2-201ENST00000624755 279 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms