Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 MTCO2P25-201ENST00000447065 681 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU7-138P-201ENST00000459479 64 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL512347.1-201ENST00000566420 503 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.124-201ENST00000363339 93 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 SNORD32B-201ENST00000364460 84 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-157P-201ENST00000383957 107 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 SNORD116-12-201ENST00000384468 92 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU6-817P-201ENST00000391083 104 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RPS20P2-201ENST00000402520 389 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL117339.3-201ENST00000418733 162 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL360271.2-201ENST00000447710 161 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AL122001.1-201ENST00000457027 370 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 RNU5F-4P-201ENST00000516581 114 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC107934.1-201ENST00000522215 217 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 CTHRC1P1-201ENST00000605383 469 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 MIR15A-201ENST00000607334 83 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 AC097478.2-201ENST00000610572 514 ntBASIC0.16□□□□□ -2.38
SYNE1Q8NF91 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.16□□□□□ -2.38
SYNE1Q8NF91 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.33-201ENST00000362591 102 ntBASIC0.15□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.302-201ENST00000364997 102 ntBASIC0.15□□□□□ -2.38
SYNE1Q8NF91 SNORA32.2-201ENST00000384049 122 ntBASIC0.15□□□□□ -2.38
SYNE1Q8NF91 Y_RNA.468-201ENST00000384298 102 ntBASIC0.15□□□□□ -2.38
SYNE1Q8NF91 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC0.15□□□□□ -2.38
SYNE1Q8NF91 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.15□□□□□ -2.38
SYNE1Q8NF91 CYCTP-201ENST00000504253 315 ntBASIC0.15□□□□□ -2.38
SYNE1Q8NF91 MIR3146-201ENST00000580367 79 ntBASIC0.15□□□□□ -2.38
SYNE1Q8NF91 AC008993.2-201ENST00000631744 806 ntBASIC0.15□□□□□ -2.38
SYNE1Q8NF91 AC068205.3-201ENST00000636385 468 ntBASIC0.15□□□□□ -2.38
SYNE1Q8NF91 AC106858.1-201ENST00000637497 429 ntBASIC0.15□□□□□ -2.38
SYNE1Q8NF91 RNU6-501P-201ENST00000364072 100 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 SNORA25-201ENST00000384384 134 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-150P-201ENST00000516237 95 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AP003049.1-201ENST00000529418 457 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC090115.3-201ENST00000553218 849 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC009712.1-201ENST00000564938 316 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC022432.1-201ENST00000595739 310 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AL596327.1-201ENST00000603629 213 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-85P-201ENST00000605989 107 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC022893.3-201ENST00000607665 437 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC008163.1-202ENST00000636004 2889 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 SNORA63.3-201ENST00000362682 132 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNY1P12-201ENST00000364251 105 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 SNORA22-201ENST00000383907 134 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 SNORA29-201ENST00000384183 140 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 SNORA22C-201ENST00000384614 134 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RPS26P42-201ENST00000413485 326 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MTND2P31-201ENST00000512602 616 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-1146P-201ENST00000516282 102 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MIR3664-201ENST00000579074 99 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC040896.1-201ENST00000613819 479 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AL513423.1-201ENST00000621695 132 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MIR1248-201ENST00000629190 106 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MIRLET7D-201ENST00000362263 87 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-858P-201ENST00000362436 107 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-433P-201ENST00000363216 104 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU5E-10P-201ENST00000363506 118 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.514-201ENST00000384528 112 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MIR544A-201ENST00000384855 91 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MIR601-201ENST00000385256 79 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 HIGD1AP15-201ENST00000416198 280 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 PIGFP2-201ENST00000421400 651 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC105758.1-201ENST00000506038 399 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 DEFB108A-201ENST00000530110 222 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AL034555.1-201ENST00000604816 211 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AP000860.1-201ENST00000605250 559 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-179P-201ENST00000363350 107 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.185-201ENST00000363894 100 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNA5SP205-201ENST00000364653 136 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RNU6-1026P-201ENST00000384465 108 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RPS3AP36-201ENST00000398190 775 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 MTND5P17-201ENST00000418405 1603 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 AC012306.1-201ENST00000423267 114 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RPS27P16-201ENST00000425758 201 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 GAPDHP17-201ENST00000449858 1001 ntBASIC0.15□□□□□ -2.39
SYNE1Q8NF91 RPL39P38-201ENST00000467018 153 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms