Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 Z98751.3-201ENST00000604447 521 ntBASIC2.38□□□□□ -2.03
BEST3Q8N1M1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.38□□□□□ -2.03
BEST3Q8N1M1 AC137590.2-201ENST00000619709 240 ntBASIC2.38□□□□□ -2.03
BEST3Q8N1M1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.38□□□□□ -2.03
BEST3Q8N1M1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
BEST3Q8N1M1 AL691447.3-201ENST00000635020 330 ntBASIC2.38□□□□□ -2.03
BEST3Q8N1M1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.38□□□□□ -2.03
BEST3Q8N1M1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.37□□□□□ -2.03
BEST3Q8N1M1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.37□□□□□ -2.03
BEST3Q8N1M1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.37□□□□□ -2.03
BEST3Q8N1M1 Y_RNA.48-201ENST00000362710 103 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 SNORA25.6-201ENST00000364121 118 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 SNORA36A-201ENST00000384221 132 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 Y_RNA.460-201ENST00000384255 102 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 MIR29B2-201ENST00000385055 81 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 RNA5SP494-201ENST00000410653 129 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AF228730.4-201ENST00000421457 183 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AL590556.1-201ENST00000423231 483 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AL353752.1-201ENST00000454946 260 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 RN7SKP210-201ENST00000459176 261 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 RPL23AP75-201ENST00000491601 451 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AC021146.2-201ENST00000504736 556 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 RNA5SP320-201ENST00000516263 124 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.37□□□□□ -2.03
BEST3Q8N1M1 CYP4A27P-201ENST00000567218 190 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AL713866.2-201ENST00000603579 219 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AL133255.1-201ENST00000606374 441 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AC013412.1-201ENST00000610687 192 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 AC090574.1-201ENST00000623186 233 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 SCARNA4-201ENST00000629045 128 ntBASIC2.37□□□□□ -2.03
BEST3Q8N1M1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AC069528.2-201ENST00000624849 1991 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 MTND5P10-201ENST00000603719 1809 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 RNU6-1159P-201ENST00000362933 107 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 Y_RNA.146-201ENST00000363549 102 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 XGY1-201ENST00000381172 446 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 RNU6-890P-201ENST00000384121 107 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 RNU2-25P-201ENST00000411041 191 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 HMGN2P35-201ENST00000412164 270 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 RPS20P15-201ENST00000412792 311 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AL358453.1-201ENST00000422522 250 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 CYP2C59P-201ENST00000457790 269 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AC093303.1-201ENST00000514549 295 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 RNU6-264P-201ENST00000517134 104 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 RN7SKP40-201ENST00000517211 242 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AL590705.4-201ENST00000532209 134 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 CYP2C61P-201ENST00000604072 290 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AL050343.2-201ENST00000607338 280 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AC005014.2-201ENST00000607795 599 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AC008121.3-201ENST00000618726 433 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AC090517.3-201ENST00000625170 141 ntBASIC2.36□□□□□ -2.03
BEST3Q8N1M1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
BEST3Q8N1M1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
BEST3Q8N1M1 RNU4-15P-201ENST00000362613 141 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 RNY1P16-201ENST00000363063 111 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 SNORD56.5-201ENST00000364281 72 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 RNA5SP240-201ENST00000365355 128 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
BEST3Q8N1M1 MTCYBP2-201ENST00000407745 171 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 HMGB3P2-201ENST00000411913 584 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AC090515.1-201ENST00000465295 476 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AC087477.1-201ENST00000465747 340 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 RPL30P10-201ENST00000488148 337 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AC068781.1-201ENST00000488231 618 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 RPL17P19-201ENST00000489069 552 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AF186996.7-201ENST00000492781 209 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 CKS1BP2-201ENST00000497342 240 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.35□□□□□ -2.03
BEST3Q8N1M1 HMGN1P13-201ENST00000505795 138 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 RNU7-175P-201ENST00000515915 61 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 RNU6-586P-201ENST00000517265 104 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.35□□□□□ -2.03
BEST3Q8N1M1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AC005520.5-201ENST00000613926 164 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AL359314.1-201ENST00000616913 261 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.35□□□□□ -2.03
BEST3Q8N1M1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AC006026.1-201ENST00000444025 1803 ntBASIC2.35□□□□□ -2.03
BEST3Q8N1M1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
BEST3Q8N1M1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.34□□□□□ -2.03
BEST3Q8N1M1 SNORD115-32-201ENST00000364079 82 ntBASIC2.34□□□□□ -2.03
BEST3Q8N1M1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
BEST3Q8N1M1 MIR27B-201ENST00000385129 97 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms