Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AC092268.1-201ENST00000342691 405 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 RNU6-486P-201ENST00000363116 107 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 SNORA25.6-201ENST00000364121 118 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 SNORD42.2-201ENST00000365570 69 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 RNU6-1286P-201ENST00000383871 107 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 RNU6-890P-201ENST00000384121 107 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 RNU1-57P-201ENST00000384491 166 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 RNU6-331P-201ENST00000384724 107 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 MIR186-201ENST00000384988 86 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 MIR524-201ENST00000385242 87 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 RNU4-53P-201ENST00000410828 140 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AC138623.1-201ENST00000418060 216 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS52Q8N1B4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS52Q8N1B4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AL445687.1-201ENST00000439946 251 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.72□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.639-201ENST00000458981 102 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AC104564.1-201ENST00000493028 407 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AC022447.4-201ENST00000504053 364 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AC093303.1-201ENST00000514549 295 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 CBX3P8-201ENST00000532412 525 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.72□□□□□ -1.97
VPS52Q8N1B4 AC073410.2-201ENST00000603240 332 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 CYP2C61P-201ENST00000604072 290 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 ZNF299P-201ENST00000406845 1804 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
VPS52Q8N1B4 Z75746.1-201ENST00000440243 2080 ntBASIC2.72□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.146-201ENST00000363549 102 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 RNU6-595P-201ENST00000363944 107 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 RNU6-461P-201ENST00000364195 107 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 Y_RNA.533-201ENST00000384596 114 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 MIR518C-201ENST00000384822 101 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 Z98742.3-201ENST00000418637 326 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.71□□□□□ -1.98
VPS52Q8N1B4 EIF4EP4-201ENST00000424916 578 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 RPL30P1-201ENST00000488676 339 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.71□□□□□ -1.98
VPS52Q8N1B4 AC093249.1-201ENST00000567049 203 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 MIR5701-3-201ENST00000578890 82 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 AC090616.3-201ENST00000582184 217 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.71□□□□□ -1.98
VPS52Q8N1B4 MIR5701-1-201ENST00000585138 82 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 MIR4719-201ENST00000585233 84 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 AC005014.2-201ENST00000607795 599 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 MIR5701-2-201ENST00000615634 82 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 MIR7157-201ENST00000635801 60 ntBASIC2.71□□□□□ -1.98
VPS52Q8N1B4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
VPS52Q8N1B4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.71□□□□□ -1.98
VPS52Q8N1B4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 RNU5B-2P-201ENST00000363036 113 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 Y_RNA.394-201ENST00000383942 103 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 Y_RNA.395-201ENST00000383945 109 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 RNU6-1040P-201ENST00000383974 107 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 MTND1P14-201ENST00000427400 950 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AL121594.1-201ENST00000475906 575 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 RNU5F-2P-201ENST00000516066 82 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 RNA5SP82-201ENST00000516707 92 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 MRPS36P4-201ENST00000534436 298 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AC021231.3-201ENST00000558497 370 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 MIR3136-201ENST00000583498 78 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AC044792.1-201ENST00000593294 196 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AC080078.3-201ENST00000605407 463 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AL080274.1-201ENST00000605565 220 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 HMGB1P24-202ENST00000615653 685 ntBASIC2.7□□□□□ -1.98
VPS52Q8N1B4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
VPS52Q8N1B4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 OR56A5-201ENST00000340110 738 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 RNU6-1115P-201ENST00000362490 106 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 RNU6-212P-201ENST00000362642 104 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 SNORD114-30-201ENST00000364448 72 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 RNU6-142P-201ENST00000384019 107 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 RNU6-968P-201ENST00000384076 107 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 Y_RNA.504-201ENST00000384481 104 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 MIR559-201ENST00000385188 96 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 RNA5SP210-201ENST00000391034 120 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 AL358453.1-201ENST00000422522 250 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 AC008267.5-201ENST00000424928 265 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 GPM6BP3-201ENST00000442797 145 ntBASIC2.69□□□□□ -1.98
VPS52Q8N1B4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.69□□□□□ -1.98
VPS52Q8N1B4 snoU13.26-201ENST00000459452 105 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms