Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL132822.1-201ENST00000617063 513 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 SNORA43.4-201ENST00000629559 138 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 AL450472.1-202ENST00000637286 180 ntBASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
C9orf40Q8IXQ3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AL356292.1-201ENST00000283110 373 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 Y_RNA.414-201ENST00000384011 101 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 SNORA36A-201ENST00000384221 132 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 U8.13-201ENST00000390842 128 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 SNORA46.1-201ENST00000391069 153 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 SNORA12-201ENST00000391162 147 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 SNORD23.1-201ENST00000408212 104 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 MIR1277-201ENST00000408536 78 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 ZNF885P-201ENST00000420174 1098 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AL445685.2-201ENST00000422551 342 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 RPS29P25-201ENST00000481709 171 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 RN7SL274P-201ENST00000492268 272 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 MTCO1P29-201ENST00000496868 288 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC114801.2-201ENST00000503825 781 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC096745.1-201ENST00000509945 370 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-256P-201ENST00000516747 97 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC107953.1-201ENST00000522216 297 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC021231.3-201ENST00000558497 370 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC026271.5-201ENST00000577873 130 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 MIR3923-201ENST00000579521 83 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AL031274.2-201ENST00000599419 203 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AL078605.1-201ENST00000603529 500 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC012493.3-201ENST00000604494 112 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC100810.6-201ENST00000638068 285 ntBASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
C9orf40Q8IXQ3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 Y_RNA.157-201ENST00000363638 102 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-743P-201ENST00000364151 106 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-611P-201ENST00000384276 104 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-933P-201ENST00000384424 107 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 MIR583-201ENST00000384846 75 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 MTCYBP2-201ENST00000407745 171 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 AC009161.1-201ENST00000417306 376 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 USP9YP28-201ENST00000435142 589 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 AL137159.1-201ENST00000452808 512 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 RNA5SP182-201ENST00000516064 82 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-567P-201ENST00000516746 107 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 RNA5SP137-201ENST00000516833 135 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 CPDP1-201ENST00000579660 283 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 SNRPGP17-201ENST00000603780 214 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 AP000907.4-201ENST00000604143 237 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 Z98751.3-201ENST00000604447 521 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 AC007014.2-201ENST00000615581 479 ntBASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.73□□□□□ -2.13
C9orf40Q8IXQ3 SNORD32B-201ENST00000364460 84 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 MIR521-1-201ENST00000384902 87 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 MIR1294-201ENST00000408503 142 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 RNA5SP201-201ENST00000410316 124 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 AL513185.2-201ENST00000425543 193 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 AL645568.3-201ENST00000433683 316 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 RNU7-187P-201ENST00000458985 68 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 RNA5SP364-201ENST00000516938 78 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 RNU6-1314P-201ENST00000517139 104 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 CYP4A27P-201ENST00000567218 190 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 MIR3672-201ENST00000584290 82 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 AC146944.4-201ENST00000602697 718 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 AL138726.1-201ENST00000614873 333 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 AC009033.1-201ENST00000624279 431 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 MIR1248-201ENST00000629190 106 ntBASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
C9orf40Q8IXQ3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
C9orf40Q8IXQ3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 U3.9-201ENST00000363823 204 ntBASIC1.71□□□□□ -2.14
C9orf40Q8IXQ3 MIR9-3-201ENST00000385084 90 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms