Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 MIR4286-201ENST00000580651 93 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 AL391813.1-201ENST00000603098 260 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 AC018692.3-201ENST00000623929 123 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 AC008873.1-201ENST00000625051 138 ntBASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.61□□□□□ -1.83
UBE3DQ7Z6J8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 AC007496.3-201ENST00000624987 3443 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 Y_RNA.40-201ENST00000362645 93 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-655P-201ENST00000362858 107 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 Y_RNA.456-201ENST00000384232 111 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-198P-201ENST00000384258 104 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 HMGN2P8-201ENST00000391458 268 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 AL357075.1-201ENST00000404107 726 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 AC027124.2-201ENST00000428249 105 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 RPS29P7-201ENST00000439662 171 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 AC074290.1-201ENST00000448883 135 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 AC107027.2-201ENST00000512197 115 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 SNORA70.12-201ENST00000516084 153 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 CYCSP30-201ENST00000546447 172 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 MIR548X2-201ENST00000579776 100 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 MIR5006-201ENST00000583027 110 ntBASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.6□□□□□ -1.83
UBE3DQ7Z6J8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 SNORD114-7-201ENST00000362520 77 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 RNA5SP322-201ENST00000363617 119 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-151P-201ENST00000364158 107 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 AP002088.1-201ENST00000382740 395 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 MIR626-201ENST00000385032 94 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 MIR569-201ENST00000385228 96 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 MIR526A2-201ENST00000390198 65 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 RNU6-578P-201ENST00000390980 103 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 Y_RNA.629-201ENST00000411368 105 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 AC008267.6-201ENST00000441664 139 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 SNRPGP5-201ENST00000456003 220 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 U8.19-201ENST00000459095 133 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 SRIP1-201ENST00000489235 288 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 AC087499.8-201ENST00000578406 226 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 VN1R85P-201ENST00000601587 426 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 MIR486-1-201ENST00000612171 68 ntBASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UBE3DQ7Z6J8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
UBE3DQ7Z6J8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
UBE3DQ7Z6J8 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AC134026.1-201ENST00000623249 2239 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 RNU1-57P-201ENST00000384491 166 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 RNU1-89P-201ENST00000384592 164 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 MIR186-201ENST00000384988 86 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 SNORA26.5-201ENST00000391215 123 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 RNA5SP504-201ENST00000410676 117 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AL139247.1-201ENST00000422768 325 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AC010099.1-201ENST00000455434 375 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AC145146.1-201ENST00000496370 254 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AC021269.2-201ENST00000532318 330 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AC025281.1-201ENST00000567026 265 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 RNU1-30P-201ENST00000606575 163 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AC069294.1-201ENST00000608397 350 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AL391903.3-201ENST00000612158 163 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 uc_338.14-201ENST00000613162 166 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 Y_RNA.802-201ENST00000614892 130 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 AC069528.2-201ENST00000624849 1991 ntBASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3DQ7Z6J8 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UBE3DQ7Z6J8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms