Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 MIR605-201ENST00000385078 83 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.27□□□□□ -2.37
USP54Q70EL1 RPL23AP30-201ENST00000432419 501 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 AL358794.1-201ENST00000445689 381 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 RNU7-14P-201ENST00000459331 62 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 AC104982.1-201ENST00000478775 574 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 RNU5F-4P-201ENST00000516581 114 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 AC007834.2-201ENST00000536310 343 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 SNORA75B-201ENST00000384053 137 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 AC092423.1-201ENST00000430165 186 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 RSL24D1P8-201ENST00000434442 492 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.27□□□□□ -2.37
USP54Q70EL1 BET1P1-201ENST00000482276 359 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 RPS26P48-201ENST00000491713 339 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 AC010587.2-201ENST00000511727 448 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.27□□□□□ -2.37
USP54Q70EL1 AC012467.1-201ENST00000607740 256 ntBASIC0.27□□□□□ -2.37
USP54Q70EL1 RNU4-79P-201ENST00000362764 141 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 RNU5A-8P-201ENST00000364102 114 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 SNORD31B-201ENST00000364977 69 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 MIR10A-201ENST00000385043 110 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 MTND4P3-201ENST00000417829 541 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 AC006366.1-201ENST00000422002 759 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.26□□□□□ -2.37
USP54Q70EL1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.26□□□□□ -2.37
USP54Q70EL1 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 RNU7-90P-201ENST00000459216 62 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 RNU6-947P-201ENST00000516264 106 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 RNU6-1146P-201ENST00000516282 102 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 MIR3923-201ENST00000579521 83 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 RPL17P51-201ENST00000605218 238 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.26□□□□□ -2.37
USP54Q70EL1 AL158163.2-201ENST00000619110 700 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 RMST_7.1-201ENST00000621935 268 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 MIR338-201ENST00000636369 67 ntBASIC0.26□□□□□ -2.37
USP54Q70EL1 SNORA72.2-201ENST00000365028 127 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 RNU6-609P-201ENST00000365459 107 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.25□□□□□ -2.37
USP54Q70EL1 MTCO2P1-201ENST00000424648 477 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 CETN4P-201ENST00000432407 469 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 FABP5P4-201ENST00000437203 171 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 AP000542.1-201ENST00000448473 371 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.25□□□□□ -2.37
USP54Q70EL1 AC119751.4-201ENST00000507498 357 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.25□□□□□ -2.37
USP54Q70EL1 AC109445.1-201ENST00000512356 383 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 RNU6-1041P-201ENST00000516254 102 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.25□□□□□ -2.37
USP54Q70EL1 LRRC6P1-201ENST00000532188 885 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 AL360219.1-201ENST00000610230 366 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 AL138726.1-201ENST00000614873 333 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 AC006927.4-201ENST00000639187 543 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 AC092104.1-201ENST00000497346 1441 ntBASIC0.25□□□□□ -2.37
USP54Q70EL1 RNU6-462P-201ENST00000362659 105 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 Y_RNA.390-201ENST00000383932 102 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AL603865.2-201ENST00000401679 213 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 RPS20P2-201ENST00000402520 389 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 MTND3P20-201ENST00000407663 186 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 RPS3AP1-201ENST00000413190 320 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.24□□□□□ -2.37
USP54Q70EL1 HIGD1AP15-201ENST00000416198 280 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 VPS26BP1-201ENST00000417155 755 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AC060773.1-201ENST00000421698 310 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AC011233.1-201ENST00000422812 283 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.24□□□□□ -2.37
USP54Q70EL1 ART2BP-201ENST00000453501 499 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 TRBVB-201ENST00000477100 408 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AC098869.1-201ENST00000481627 292 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AC112206.3-201ENST00000514578 389 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 RNA5SP216-201ENST00000516111 123 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.24□□□□□ -2.37
USP54Q70EL1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.24□□□□□ -2.37
USP54Q70EL1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.24□□□□□ -2.37
USP54Q70EL1 MTND4LP25-201ENST00000570218 163 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AC091135.1-201ENST00000585943 307 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AL353765.1-201ENST00000605514 183 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AC024060.1-201ENST00000607052 494 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.24□□□□□ -2.37
USP54Q70EL1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.24□□□□□ -2.37
USP54Q70EL1 RNU6-371P-201ENST00000364283 108 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 SNORA2A-201ENST00000383885 135 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 RNU6-950P-201ENST00000384651 107 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 RNU6-1179P-201ENST00000384667 107 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 RNU6-1245P-201ENST00000411130 106 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 RNU6-293P-201ENST00000411259 106 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.24□□□□□ -2.37
USP54Q70EL1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.24□□□□□ -2.37
USP54Q70EL1 RPL23AP95-201ENST00000426806 265 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AL606489.2-201ENST00000433886 234 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AC243964.1-201ENST00000441814 261 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 MTCYBP1-201ENST00000454315 1119 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 U7.7-201ENST00000459276 60 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.24□□□□□ -2.37
USP54Q70EL1 AC113347.3-201ENST00000509113 148 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 RNU6-334P-201ENST00000517072 102 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 ADI1P3-201ENST00000549509 470 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.24□□□□□ -2.37
USP54Q70EL1 AC126177.8-201ENST00000618339 1015 ntBASIC0.24□□□□□ -2.37
USP54Q70EL1 RNU5E-7P-201ENST00000365290 117 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms