Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC018638.8-201ENST00000588755 281 ntBASIC2.04□□□□□ -2.08
NHLRC1Q6VVB1 CYP2C61P-201ENST00000604072 290 ntBASIC2.04□□□□□ -2.08
NHLRC1Q6VVB1 AC005034.5-201ENST00000604219 466 ntBASIC2.04□□□□□ -2.08
NHLRC1Q6VVB1 BNIP3P10-201ENST00000605360 577 ntBASIC2.04□□□□□ -2.08
NHLRC1Q6VVB1 AL121757.2-201ENST00000611223 313 ntBASIC2.04□□□□□ -2.08
NHLRC1Q6VVB1 AL590808.1-201ENST00000618696 141 ntBASIC2.04□□□□□ -2.08
NHLRC1Q6VVB1 U1.36-201ENST00000620684 176 ntBASIC2.04□□□□□ -2.08
NHLRC1Q6VVB1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.04□□□□□ -2.08
NHLRC1Q6VVB1 MTND5P6-201ENST00000422338 1798 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AC009541.1-201ENST00000438279 2662 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 RNU6-227P-201ENST00000362865 103 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 Y_RNA.99-201ENST00000363138 105 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 U3.9-201ENST00000363823 204 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 Y_RNA.231-201ENST00000364358 102 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 RNU6-26P-201ENST00000383985 107 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 RNU6-933P-201ENST00000384424 107 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 Y_RNA.573-201ENST00000384763 105 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 MIR144-201ENST00000384886 86 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 MIR17-201ENST00000385012 84 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 RNU6-1009P-201ENST00000390996 107 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 SNORA26.3-201ENST00000391119 136 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 RNU6-332P-201ENST00000391193 108 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AL033519.2-201ENST00000403958 392 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AL356432.1-201ENST00000405809 419 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 MTCYBP2-201ENST00000407745 171 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AL359672.1-201ENST00000442302 409 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 HMGN2P26-201ENST00000463169 339 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AC005741.1-201ENST00000511094 432 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AC008413.1-201ENST00000511864 177 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 HSPE1P18-201ENST00000517602 280 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 CYP4A27P-201ENST00000567218 190 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AC092807.2-201ENST00000609367 243 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AL132765.2-201ENST00000610812 351 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AC007742.2-201ENST00000618226 398 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 AC099654.5-201ENST00000636479 350 ntBASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NHLRC1Q6VVB1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 MIRLET7G-201ENST00000362280 84 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-845P-201ENST00000362578 103 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 SNORD115-3-201ENST00000363100 82 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.184-201ENST00000363884 108 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-743P-201ENST00000364151 106 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-522P-201ENST00000364497 107 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 SNORA51.11-201ENST00000384442 131 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 MIR514A2-201ENST00000385131 88 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 MIR514A3-201ENST00000385132 88 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 RNU4-26P-201ENST00000410270 107 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.615-201ENST00000410769 117 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 UBE2V1P4-201ENST00000425374 344 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 SRIP2-201ENST00000428470 166 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 ERLEC1P1-201ENST00000433806 578 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AC087884.1-201ENST00000469738 328 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 TRBVA-201ENST00000498804 316 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 MTND3P22-201ENST00000510932 243 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-277P-201ENST00000516272 106 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 RNU6-612P-201ENST00000516909 102 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AC025423.5-201ENST00000550230 219 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AC233702.2-202ENST00000562547 291 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 MIR4795-201ENST00000584182 89 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AL022345.1-201ENST00000607292 135 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AL133216.2-202ENST00000634512 349 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AC100810.6-201ENST00000638068 285 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AP000553.5-201ENST00000641933 54 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 AC121333.1-201ENST00000567488 2709 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 OR4G1P-203ENST00000641984 1631 ntBASIC2.02□□□□□ -2.09
NHLRC1Q6VVB1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 RNU4-15P-201ENST00000362613 141 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.58-201ENST00000362807 102 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.142-201ENST00000363491 102 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.154-201ENST00000363624 102 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 RNU4-76P-201ENST00000364509 141 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 RNY3P1-201ENST00000365085 102 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 RNY3-201ENST00000365484 102 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 Y_RNA.490-201ENST00000384413 102 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 SNORA46.1-201ENST00000391069 153 ntBASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.01□□□□□ -2.09
NHLRC1Q6VVB1 MTND2P29-201ENST00000438595 412 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms