Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 snoU13.6-201ENST00000458785 104 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.98□□□□□ -2.09
CASC4Q6P4E1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.98□□□□□ -2.09
CASC4Q6P4E1 ATP5EP1-201ENST00000510257 156 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 Y_RNA.655-201ENST00000515919 96 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 AP005660.1-201ENST00000522972 293 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.98□□□□□ -2.09
CASC4Q6P4E1 AC026371.1-201ENST00000551867 419 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 ZNF519P2-201ENST00000557032 169 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 CPDP1-201ENST00000579660 283 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 MIR3935-201ENST00000583472 104 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.98□□□□□ -2.09
CASC4Q6P4E1 AC009994.1-201ENST00000606889 253 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 DUXAP9-208ENST00000622815 614 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
CASC4Q6P4E1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.98□□□□□ -2.09
CASC4Q6P4E1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 RNU1-58P-201ENST00000362413 163 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 U8.2-201ENST00000363156 134 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 Y_RNA.123-201ENST00000363338 102 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 SNORD113-7-201ENST00000363762 77 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 RNU2-20P-201ENST00000410425 191 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 VN1R36P-201ENST00000414936 291 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 TRBV12-1-201ENST00000479785 344 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 MTCO1P29-201ENST00000496868 288 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 AC114801.2-201ENST00000503825 781 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 AC091435.1-201ENST00000505442 584 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 AC005741.1-201ENST00000511094 432 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 MIR4648-201ENST00000580107 72 ntBASIC1.97□□□□□ -2.09
CASC4Q6P4E1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CASC4Q6P4E1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 RNU4-12P-201ENST00000365233 139 ntBASIC1.96□□□□□ -2.1
CASC4Q6P4E1 RNU6-128P-201ENST00000383976 107 ntBASIC1.96□□□□□ -2.1
CASC4Q6P4E1 SNORA29-201ENST00000384183 140 ntBASIC1.96□□□□□ -2.1
CASC4Q6P4E1 SNRPEP10-201ENST00000420249 274 ntBASIC1.96□□□□□ -2.1
CASC4Q6P4E1 AL445646.1-201ENST00000431784 216 ntBASIC1.96□□□□□ -2.1
CASC4Q6P4E1 MTND2P29-201ENST00000438595 412 ntBASIC1.96□□□□□ -2.1
CASC4Q6P4E1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 RNU7-187P-201ENST00000458985 68 ntBASIC1.96□□□□□ -2.1
CASC4Q6P4E1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 AC016256.1-201ENST00000547971 354 ntBASIC1.96□□□□□ -2.1
CASC4Q6P4E1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 AL136221.1-201ENST00000621449 509 ntBASIC1.96□□□□□ -2.1
CASC4Q6P4E1 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CASC4Q6P4E1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.95□□□□□ -2.1
CASC4Q6P4E1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.95□□□□□ -2.1
CASC4Q6P4E1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 Y_RNA.89-201ENST00000363031 102 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 RNA5SP126-201ENST00000365092 109 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 Y_RNA.332-201ENST00000365271 113 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 RNU6-1215P-201ENST00000384441 102 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 Y_RNA.530-201ENST00000384587 101 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 MIR521-1-201ENST00000384902 87 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.95□□□□□ -2.1
CASC4Q6P4E1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.95□□□□□ -2.1
CASC4Q6P4E1 AL353689.1-201ENST00000438895 199 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 MTCO3P18-201ENST00000440206 761 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.95□□□□□ -2.1
CASC4Q6P4E1 FTH1P25-201ENST00000447665 469 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.95□□□□□ -2.1
CASC4Q6P4E1 RPL23AP42-201ENST00000471152 471 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 FAM206BP-201ENST00000510179 541 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.95□□□□□ -2.1
CASC4Q6P4E1 RNU6-1098P-201ENST00000516772 96 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 MRPS36P4-201ENST00000534436 298 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 AC090517.1-201ENST00000569307 266 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 AC146944.4-201ENST00000602697 718 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 MIR8076-201ENST00000611401 83 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 AP006437.1-201ENST00000641440 3685 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CASC4Q6P4E1 AC008555.8-201ENST00000623602 2168 ntBASIC1.95□□□□□ -2.1
CASC4Q6P4E1 RNU5B-2P-201ENST00000363036 113 ntBASIC1.94□□□□□ -2.1
CASC4Q6P4E1 SNORD114-6-201ENST00000364393 72 ntBASIC1.94□□□□□ -2.1
CASC4Q6P4E1 RNU6-1286P-201ENST00000383871 107 ntBASIC1.94□□□□□ -2.1
CASC4Q6P4E1 RNU6-1093P-201ENST00000391194 107 ntBASIC1.94□□□□□ -2.1
CASC4Q6P4E1 AL158823.1-201ENST00000418441 478 ntBASIC1.94□□□□□ -2.1
CASC4Q6P4E1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.94□□□□□ -2.1
CASC4Q6P4E1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.94□□□□□ -2.1
CASC4Q6P4E1 AC096745.1-201ENST00000509945 370 ntBASIC1.94□□□□□ -2.1
CASC4Q6P4E1 MTND1P5-201ENST00000517906 940 ntBASIC1.94□□□□□ -2.1
CASC4Q6P4E1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.94□□□□□ -2.1
CASC4Q6P4E1 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.94□□□□□ -2.1
CASC4Q6P4E1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.94□□□□□ -2.1
CASC4Q6P4E1 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.94□□□□□ -2.1
CASC4Q6P4E1 MIR3976-201ENST00000606807 139 ntBASIC1.94□□□□□ -2.1
CASC4Q6P4E1 AL022345.1-201ENST00000607292 135 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms