Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-1287P-201ENST00000362914 107 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 RNU1-22P-201ENST00000363334 158 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-1060P-201ENST00000384664 107 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-195P-201ENST00000411352 109 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AC013410.2-201ENST00000422627 201 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AL133396.1-201ENST00000432048 687 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AL163195.1-201ENST00000496941 348 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 RNA5SP437-201ENST00000517249 129 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AP001893.2-201ENST00000526949 202 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 CYP3A52P-201ENST00000563326 91 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AC015688.6-201ENST00000577737 104 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AC078795.3-201ENST00000602913 472 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 HSPE1P19-201ENST00000603327 295 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AL590229.1-201ENST00000603497 542 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AL356157.2-201ENST00000605122 111 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AC136475.10-201ENST00000620253 385 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AC079248.2-201ENST00000623779 326 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 AC099654.5-201ENST00000636479 350 ntBASIC0.96□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-1097P-201ENST00000363586 107 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-553P-201ENST00000364047 96 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RNY4P34-201ENST00000364779 95 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 SNORA32.2-201ENST00000384049 122 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-297P-201ENST00000384636 107 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 MIR1-2-201ENST00000384961 85 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 MIR548B-201ENST00000385247 97 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 SNORA16.2-201ENST00000390991 127 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AL031577.2-201ENST00000404133 280 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RNU4-46P-201ENST00000410818 138 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AC016925.1-201ENST00000458303 298 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RPL31P3-201ENST00000458430 332 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RNU7-182P-201ENST00000459009 62 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 MTND1P22-201ENST00000510572 951 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 LRRC34P2-201ENST00000514850 553 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RNU2-69P-201ENST00000516061 100 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RN7SKP265-201ENST00000516448 223 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 MIR3682-201ENST00000581338 84 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AC234772.3-201ENST00000602277 528 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 AP001596.2-201ENST00000608410 312 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 U6.114-201ENST00000636407 96 ntBASIC0.95□□□□□ -2.26
NIPAL1Q6NVV3 RNU1-76P-201ENST00000362903 159 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-1029P-201ENST00000384109 107 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-1127P-201ENST00000384580 107 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 HMGN1P14-201ENST00000412459 517 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 HIGD1AP15-201ENST00000416198 280 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 CYCSP46-201ENST00000423569 204 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 SNX2P2-201ENST00000424553 323 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 ISCA1P6-201ENST00000427740 390 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 PGBD4P5-201ENST00000445958 426 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AC132479.1-201ENST00000449160 144 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 ATP5J2P3-201ENST00000451550 258 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 snoU13.30-201ENST00000458951 104 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 RPL39P28-201ENST00000465655 155 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AC079382.1-201ENST00000493346 557 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AC091874.1-201ENST00000511402 339 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 MTCO3P28-201ENST00000513351 515 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 RNU6-1098P-201ENST00000516772 96 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 ZNF321P-202ENST00000550843 495 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AC109446.1-201ENST00000566172 220 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AGGF1P4-201ENST00000568249 801 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 MIR4703-201ENST00000577728 79 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 MIR4781-201ENST00000585250 76 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AP003465.2-201ENST00000602571 373 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 Z99289.3-201ENST00000605586 594 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AC005520.5-201ENST00000613926 164 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 AC083806.3-201ENST00000614016 455 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 SNORA43.4-201ENST00000629559 138 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 SEPT14P19-203ENST00000633205 211 ntBASIC0.94□□□□□ -2.26
NIPAL1Q6NVV3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
NIPAL1Q6NVV3 AC092268.1-201ENST00000342691 405 ntBASIC0.93□□□□□ -2.26
NIPAL1Q6NVV3 RNU4-21P-201ENST00000362802 126 ntBASIC0.93□□□□□ -2.26
NIPAL1Q6NVV3 SNORA63D-201ENST00000364359 132 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms