Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 MRPS18CP6-201ENST00000423587 223 ntBASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 SNRPEP8-201ENST00000442866 260 ntBASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 NFU1P2-201ENST00000448700 469 ntBASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 RPL39P36-201ENST00000490784 156 ntBASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 AC114981.1-201ENST00000503897 678 ntBASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 RNU6-714P-201ENST00000516963 103 ntBASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 BNIP3P30-201ENST00000601184 574 ntBASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.24□□□□□ -2.45
NUP188Q5SRE5 MIR217-201ENST00000384817 110 ntBASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 SNORA12-201ENST00000391162 147 ntBASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 STAG3L5P-204ENST00000443759 179 ntBASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 SNORA31.3-201ENST00000516029 96 ntBASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 RNU4-5P-201ENST00000607255 135 ntBASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-0.25□□□□□ -2.45
NUP188Q5SRE5 AC107982.1-201ENST00000507171 1300 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 MIR340-201ENST00000362125 95 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 SNORD49B-201ENST00000365172 72 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 RPL23AP50-201ENST00000434149 455 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 TPTE2P1-204ENST00000435256 593 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 TMEM251P1-201ENST00000503717 318 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AC027338.1-201ENST00000514840 825 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 SNORD60.2-201ENST00000516883 86 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 SNORA31.19-201ENST00000517079 126 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AC133794.1-201ENST00000602731 914 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AC013244.3-201ENST00000605614 388 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AP001033.2-201ENST00000609701 1003 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AL357080.1-201ENST00000617394 239 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 AP000943.4-201ENST00000622912 357 ntBASIC-0.26□□□□□ -2.45
NUP188Q5SRE5 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 SNORA32.1-201ENST00000364514 115 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 OFD1P7Y-201ENST00000454643 1155 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 HMGB1P29-201ENST00000505659 499 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 AP002001.1-203ENST00000534002 267 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 TPRKBP2-201ENST00000565969 475 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 AC106754.2-201ENST00000623006 233 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 AP000676.3-201ENST00000623299 569 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 MIR103A2-201ENST00000362154 78 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 SNORA4.2-201ENST00000365313 147 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 SNORA32.3-201ENST00000384772 121 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 AL162725.1-201ENST00000435405 301 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 AL357312.1-201ENST00000603879 298 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 AC104408.1-201ENST00000605241 170 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 AL355816.2-201ENST00000610049 647 ntBASIC-0.27□□□□□ -2.45
NUP188Q5SRE5 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 RNU6-212P-201ENST00000362642 104 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 SNORA16.2-201ENST00000390991 127 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 RNA5SP496-201ENST00000391240 109 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 AC010154.1-201ENST00000425857 269 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 COX7BP2-201ENST00000437976 242 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 MTND4P25-201ENST00000441039 533 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 RNU7-59P-201ENST00000459101 61 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 AC090049.2-201ENST00000550377 109 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 MIR4431-201ENST00000579990 94 ntBASIC-0.28□□□□□ -2.45
NUP188Q5SRE5 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 MIR140-201ENST00000385282 100 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 SNORA12.2-201ENST00000391040 156 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 AC013262.1-201ENST00000426710 252 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 AC073261.1-201ENST00000429409 121 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 RNU6-922P-201ENST00000516753 99 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 AC091163.3-201ENST00000518269 1144 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 AL353778.1-201ENST00000603149 408 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 RMST_10.1-201ENST00000616309 154 ntBASIC-0.29□□□□□ -2.46
NUP188Q5SRE5 RNU6-97P-201ENST00000363387 104 ntBASIC-0.3□□□□□ -2.46
NUP188Q5SRE5 RNU6-815P-201ENST00000384080 113 ntBASIC-0.3□□□□□ -2.46
NUP188Q5SRE5 SNORD105-201ENST00000386910 85 ntBASIC-0.3□□□□□ -2.46
NUP188Q5SRE5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms