Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AC092435.3-201ENST00000565538 3654 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 MTND5P16-201ENST00000460269 1703 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.358-201ENST00000365491 99 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.557-201ENST00000384680 107 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 MIR628-201ENST00000385229 95 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 MIR181B1-201ENST00000385240 110 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 RNU1-139P-201ENST00000391307 165 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL358176.2-201ENST00000425769 204 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 TOMM22P6-201ENST00000465035 409 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL121594.1-201ENST00000475906 575 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 RPS29P26-201ENST00000477483 171 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 SCARNA17.1-201ENST00000516211 143 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 SCARNA17.2-201ENST00000516334 143 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 SNORA31.16-201ENST00000516773 139 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 RNA5SP54-201ENST00000516951 92 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL034555.1-201ENST00000604816 211 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 SCARNA17.4-201ENST00000614296 143 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 AL078596.1-201ENST00000624856 447 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 Z75746.1-201ENST00000440243 2080 ntBASIC2.86□□□□□ -1.95
PTCHD3Q3KNS1 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.27-201ENST00000362540 103 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-486P-201ENST00000363116 107 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RNY3P11-201ENST00000364153 102 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.551-201ENST00000384661 102 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 MIR1252-201ENST00000408861 65 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 EIF4EP4-201ENST00000424916 578 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RPS3P1-201ENST00000456781 192 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RPS29P12-201ENST00000460178 152 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC007215.1-201ENST00000464893 276 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AP004217.1-201ENST00000480579 346 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-1114P-201ENST00000516022 107 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 RNA5SP76-201ENST00000516277 87 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC040926.1-201ENST00000530195 238 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL442163.3-201ENST00000554110 156 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL117187.1-201ENST00000555482 181 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL355297.3-201ENST00000604082 446 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AC124312.5-201ENST00000604451 268 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AL021879.1-201ENST00000611756 288 ntBASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.85□□□□□ -1.95
PTCHD3Q3KNS1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.133-201ENST00000363428 110 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 Y_RNA.152-201ENST00000363578 100 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU4-50P-201ENST00000364361 141 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 SNORA68.1-201ENST00000364537 132 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 SNORA51.4-201ENST00000364993 124 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-541P-201ENST00000384709 110 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-1105P-201ENST00000384774 107 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNA5SP213-201ENST00000391031 106 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPL21P75-201ENST00000396599 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPL21P28-201ENST00000401418 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RN7SKP58-201ENST00000411010 305 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AL590556.1-201ENST00000423231 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 USP9YP16-201ENST00000430287 407 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC107083.1-201ENST00000439643 279 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 MTCO3P8-201ENST00000453691 755 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AP000705.1-201ENST00000454567 350 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 USP9YP23-201ENST00000455085 407 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU7-87P-201ENST00000459343 62 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPL21P39-201ENST00000463605 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC087190.1-201ENST00000484462 480 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC107032.1-201ENST00000485945 480 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC132942.1-201ENST00000486753 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC093591.1-201ENST00000491435 481 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPL21P16-201ENST00000495531 483 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU2-53P-201ENST00000516257 147 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RNU6-58P-201ENST00000517143 103 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AP002770.2-201ENST00000543613 532 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC027288.2-201ENST00000553028 243 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC027176.1-201ENST00000560204 514 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 AC103810.1-201ENST00000579873 453 ntBASIC2.84□□□□□ -1.95
PTCHD3Q3KNS1 RPS29P30-201ENST00000600975 111 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms