Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.49□□□□□ -2.17
RFX4Q33E94 AC027807.1-201ENST00000559921 996 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 HMGB1P33-201ENST00000563485 527 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 RNU6-89P-201ENST00000606519 100 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 AL357078.3-201ENST00000607528 618 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.49□□□□□ -2.17
RFX4Q33E94 PCGEM1.1-201ENST00000613431 131 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.49□□□□□ -2.17
RFX4Q33E94 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 AC068137.3-201ENST00000639191 341 ntBASIC1.49□□□□□ -2.17
RFX4Q33E94 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
RFX4Q33E94 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
RFX4Q33E94 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.48□□□□□ -2.17
RFX4Q33E94 Y_RNA.231-201ENST00000364358 102 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 SNORD114-6-201ENST00000364393 72 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 RNU6-1329P-201ENST00000365664 107 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 RNU6-378P-201ENST00000384324 107 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 MIR29C-201ENST00000385231 88 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 U8.13-201ENST00000390842 128 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 RN7SKP284-201ENST00000411002 343 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.48□□□□□ -2.17
RFX4Q33E94 MTND1P1-201ENST00000445453 368 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 MTCO2P7-201ENST00000446518 666 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 snoU13.15-201ENST00000459407 104 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 snoU13.26-201ENST00000459452 105 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC083904.1-201ENST00000487828 231 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC104564.1-201ENST00000493028 407 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC008628.2-201ENST00000502605 298 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC016632.1-201ENST00000503994 196 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC091885.1-201ENST00000506658 268 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC105313.1-201ENST00000509121 353 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 ATP5EP1-201ENST00000510257 156 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.48□□□□□ -2.17
RFX4Q33E94 AC005741.1-201ENST00000511094 432 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC092436.3-201ENST00000511788 257 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.48□□□□□ -2.17
RFX4Q33E94 SNORA19.2-201ENST00000516013 114 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 RNU6-1281P-201ENST00000516223 105 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 SNORD60.2-201ENST00000516883 86 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 RNU6-612P-201ENST00000516909 102 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC087854.1-201ENST00000519706 414 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AP005660.1-201ENST00000522972 293 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.48□□□□□ -2.17
RFX4Q33E94 AC010525.2-201ENST00000590920 195 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC025754.2-201ENST00000606491 432 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.48□□□□□ -2.17
RFX4Q33E94 OR4G1P-203ENST00000641984 1631 ntBASIC1.48□□□□□ -2.17
RFX4Q33E94 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
RFX4Q33E94 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.47□□□□□ -2.17
RFX4Q33E94 MIR340-201ENST00000362125 95 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 Y_RNA.38-201ENST00000362617 102 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 Y_RNA.318-201ENST00000365131 97 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 MIR934-201ENST00000401241 83 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 MRPS10P2-201ENST00000431226 381 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.47□□□□□ -2.17
RFX4Q33E94 HMGN2P18-201ENST00000450680 270 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 AC007547.1-201ENST00000462177 490 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 AC021146.2-201ENST00000504736 556 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 AC025465.4-201ENST00000513422 638 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 RNU6-250P-201ENST00000516958 103 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.47□□□□□ -2.17
RFX4Q33E94 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.47□□□□□ -2.17
RFX4Q33E94 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.47□□□□□ -2.17
RFX4Q33E94 AL157687.1-201ENST00000554853 619 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 AC109446.1-201ENST00000566172 220 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.47□□□□□ -2.17
RFX4Q33E94 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.47□□□□□ -2.17
RFX4Q33E94 AC104458.1-201ENST00000608243 463 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 MIR6845-201ENST00000613182 61 ntBASIC1.47□□□□□ -2.17
RFX4Q33E94 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.47□□□□□ -2.17
RFX4Q33E94 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
RFX4Q33E94 AC121333.1-201ENST00000567488 2709 ntBASIC1.46□□□□□ -2.17
RFX4Q33E94 RNU1-58P-201ENST00000362413 163 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 RNU6-451P-201ENST00000362921 107 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 Y_RNA.99-201ENST00000363138 105 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 RNU6-1090P-201ENST00000364065 94 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 RNU6-1317P-201ENST00000364582 104 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 RNU6-26P-201ENST00000383985 107 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 MIR320A-201ENST00000385302 82 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 SNORA12.2-201ENST00000391040 156 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 RNU11-3P-201ENST00000391111 133 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 EIF4E2P1-201ENST00000393781 255 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 MIR1261-201ENST00000408659 82 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 Y_RNA.615-201ENST00000410769 117 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 RNU2-41P-201ENST00000410991 178 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 MTCO3P41-201ENST00000414801 328 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 EIF4EP2-201ENST00000422816 654 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.46□□□□□ -2.18
RFX4Q33E94 MTND3P9-201ENST00000429526 346 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 C8orf59P1-201ENST00000429930 303 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 ERLEC1P1-201ENST00000433806 578 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AL359672.1-201ENST00000442302 409 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.46□□□□□ -2.18
RFX4Q33E94 RNU6-1037P-201ENST00000459571 107 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AC027575.1-201ENST00000481064 460 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
RFX4Q33E94 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.46□□□□□ -2.18
RFX4Q33E94 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms