Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-1.03□□□□□ -2.57
TFF3Q07654 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC-1.03□□□□□ -2.57
TFF3Q07654 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-1.03□□□□□ -2.57
TFF3Q07654 AC004805.2-201ENST00000605382 482 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC-1.03□□□□□ -2.57
TFF3Q07654 AL109659.3-201ENST00000624985 950 ntBASIC-1.03□□□□□ -2.57
TFF3Q07654 Y_RNA.332-201ENST00000365271 113 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 RNU6-921P-201ENST00000384361 107 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 AL049545.1-201ENST00000401856 572 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 RAP1BP3-201ENST00000407180 549 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 MIR1827-201ENST00000408549 66 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 RNU2-59P-201ENST00000410482 191 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC-1.04□□□□□ -2.58
TFF3Q07654 ZNF886P-201ENST00000450781 723 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 AC024589.1-201ENST00000512207 263 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 RNU6-567P-201ENST00000516746 107 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 AC027419.1-201ENST00000522976 328 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 AP002453.2-201ENST00000533503 320 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-1.04□□□□□ -2.58
TFF3Q07654 AF038458.1-201ENST00000588406 262 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 AC107952.2-201ENST00000606048 486 ntBASIC-1.04□□□□□ -2.58
TFF3Q07654 MIR412-201ENST00000362142 91 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 RNU6-72P-201ENST00000384285 79 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 MIR601-201ENST00000385256 79 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 SNORD41-201ENST00000386967 70 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 AC068533.2-201ENST00000411872 306 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 RAC1P6-201ENST00000423911 575 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-1.05□□□□□ -2.58
TFF3Q07654 AC109327.2-201ENST00000448339 378 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 RPL39P39-201ENST00000455840 151 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 MTCO2P18-201ENST00000457151 658 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 AC114755.3-201ENST00000481111 251 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 AC137800.2-201ENST00000574375 120 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 uc_338.16-201ENST00000621804 95 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 AC024940.5-201ENST00000622889 474 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 MIR4320-201ENST00000636981 65 ntBASIC-1.05□□□□□ -2.58
TFF3Q07654 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.06□□□□□ -2.58
TFF3Q07654 SNORD114-19-201ENST00000363072 75 ntBASIC-1.06□□□□□ -2.58
TFF3Q07654 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC-1.06□□□□□ -2.58
TFF3Q07654 RNU2-47P-201ENST00000410649 186 ntBASIC-1.06□□□□□ -2.58
TFF3Q07654 RNU4-46P-201ENST00000410818 138 ntBASIC-1.06□□□□□ -2.58
TFF3Q07654 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-1.06□□□□□ -2.58
TFF3Q07654 RPL31P53-201ENST00000457065 348 ntBASIC-1.06□□□□□ -2.58
TFF3Q07654 RNU6-703P-201ENST00000516946 107 ntBASIC-1.06□□□□□ -2.58
TFF3Q07654 CTHRC1P1-201ENST00000605383 469 ntBASIC-1.06□□□□□ -2.58
TFF3Q07654 RNU6-505P-201ENST00000384427 107 ntBASIC-1.07□□□□□ -2.58
TFF3Q07654 MIR454-201ENST00000390180 115 ntBASIC-1.07□□□□□ -2.58
TFF3Q07654 HMGN3P1-201ENST00000453847 193 ntBASIC-1.07□□□□□ -2.58
TFF3Q07654 AL160314.1-201ENST00000490836 438 ntBASIC-1.07□□□□□ -2.58
TFF3Q07654 RNU6-581P-201ENST00000516214 105 ntBASIC-1.07□□□□□ -2.58
TFF3Q07654 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-1.07□□□□□ -2.58
TFF3Q07654 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC-1.07□□□□□ -2.58
TFF3Q07654 MIR4324-201ENST00000584846 72 ntBASIC-1.07□□□□□ -2.58
TFF3Q07654 AC004067.1-201ENST00000608733 700 ntBASIC-1.07□□□□□ -2.58
TFF3Q07654 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-1.07□□□□□ -2.58
TFF3Q07654 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-1.08□□□□□ -2.58
TFF3Q07654 RNU6-1151P-201ENST00000384684 107 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 MIR186-201ENST00000384988 86 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 MIR29B2-201ENST00000385055 81 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 MIR196A1-201ENST00000388006 70 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 RNU4-27P-201ENST00000410889 139 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC-1.08□□□□□ -2.58
TFF3Q07654 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC-1.08□□□□□ -2.58
TFF3Q07654 PPP1R11P2-201ENST00000423543 382 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 GXYLT1P1-201ENST00000446657 490 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 MTND1P17-201ENST00000448961 204 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-1.08□□□□□ -2.58
TFF3Q07654 MRPL42P4-201ENST00000453267 443 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 AL670379.3-201ENST00000605040 251 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 AC034229.4-201ENST00000607861 441 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 AC093788.1-201ENST00000609356 927 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 uc_338.28-201ENST00000612082 187 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 MIR6079-201ENST00000635807 62 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 MIR3529-201ENST00000637713 78 ntBASIC-1.08□□□□□ -2.58
TFF3Q07654 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC-1.08□□□□□ -2.58
TFF3Q07654 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC-1.08□□□□□ -2.58
TFF3Q07654 RNU6-1010P-201ENST00000362757 107 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 Y_RNA.132-201ENST00000363421 102 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 RNY4P16-201ENST00000364768 94 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 SNORA4.2-201ENST00000365313 147 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 RNY3-201ENST00000365484 102 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 SNORA8.2-201ENST00000384372 139 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 MIR653-201ENST00000385279 96 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 SNORA12.1-201ENST00000390873 148 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 AC073910.1-201ENST00000445047 438 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 SCARNA18-201ENST00000459004 134 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 OR9P1P-201ENST00000496431 281 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.09□□□□□ -2.58
TFF3Q07654 SCARNA17-201ENST00000516183 144 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-1.09□□□□□ -2.58
TFF3Q07654 C1DP5-201ENST00000525775 383 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 MRPS36P5-201ENST00000551909 298 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 AP000811.1-201ENST00000603803 651 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 AC013244.3-201ENST00000605614 388 ntBASIC-1.09□□□□□ -2.58
TFF3Q07654 SNORD83B-201ENST00000386745 93 ntBASIC-1.1□□□□□ -2.59
TFF3Q07654 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
TFF3Q07654 AL357139.1-201ENST00000407792 426 ntBASIC-1.1□□□□□ -2.59
TFF3Q07654 ELOCP14-201ENST00000428070 331 ntBASIC-1.1□□□□□ -2.59
TFF3Q07654 ELOCP7-201ENST00000439968 331 ntBASIC-1.1□□□□□ -2.59
TFF3Q07654 RNU6-947P-201ENST00000516264 106 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms