Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC074085.1-201ENST00000413598 418 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.78□□□□□ -2.12
CKAP4Q07065 RPS15AP10-201ENST00000432472 382 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 AC107399.1-201ENST00000451226 265 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 RNU7-187P-201ENST00000458985 68 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.78□□□□□ -2.12
CKAP4Q07065 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.78□□□□□ -2.12
CKAP4Q07065 MRPS17P9-201ENST00000511924 393 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.78□□□□□ -2.12
CKAP4Q07065 IMMP1LP2-201ENST00000552954 492 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 AC103996.1-201ENST00000555468 102 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 BNIP3P16-201ENST00000589779 534 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.78□□□□□ -2.12
CKAP4Q07065 RNU6-91P-201ENST00000607774 107 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 AL133215.3-201ENST00000609801 448 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.78□□□□□ -2.12
CKAP4Q07065 MIR3529-201ENST00000637713 78 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 AC112487.2-201ENST00000637950 304 ntBASIC1.78□□□□□ -2.12
CKAP4Q07065 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.78□□□□□ -2.13
CKAP4Q07065 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CKAP4Q07065 RNU6-797P-201ENST00000363101 109 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 RNU6-593P-201ENST00000364716 112 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.77□□□□□ -2.13
CKAP4Q07065 AL512604.1-201ENST00000404812 257 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 SNORA11.1-201ENST00000408133 129 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 U6atac.2-201ENST00000408644 118 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 RNU4-14P-201ENST00000410858 122 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 AIMP1P2-201ENST00000425294 312 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.77□□□□□ -2.13
CKAP4Q07065 RPS29P27-201ENST00000463711 170 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 AC107032.1-201ENST00000485945 480 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 HMGB3P17-201ENST00000504195 649 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 AC116337.1-201ENST00000509680 687 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 PTP4A1P4-201ENST00000512479 322 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.77□□□□□ -2.13
CKAP4Q07065 DEFB122-202ENST00000569013 197 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.77□□□□□ -2.13
CKAP4Q07065 AC113139.1-201ENST00000605049 239 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CKAP4Q07065 MTND5P30-201ENST00000452896 1731 ntBASIC1.77□□□□□ -2.13
CKAP4Q07065 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
CKAP4Q07065 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CKAP4Q07065 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.76□□□□□ -2.13
CKAP4Q07065 RNU4-73P-201ENST00000363164 141 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 Y_RNA.356-201ENST00000365475 113 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 Y_RNA.482-201ENST00000384377 111 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 Y_RNA.509-201ENST00000384506 99 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 RNU6-1106P-201ENST00000390845 107 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 RNA5SP390-201ENST00000410191 113 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 RNU6-325P-201ENST00000411132 105 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 RPL37P10-201ENST00000412884 288 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.76□□□□□ -2.13
CKAP4Q07065 BX276092.3-201ENST00000424182 230 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.76□□□□□ -2.13
CKAP4Q07065 AC003989.2-201ENST00000440224 169 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 AC243964.1-201ENST00000441814 261 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.76□□□□□ -2.13
CKAP4Q07065 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.76□□□□□ -2.13
CKAP4Q07065 MTND4P17-201ENST00000470444 350 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.76□□□□□ -2.13
CKAP4Q07065 AK3P2-201ENST00000507976 429 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 RPL39P5-202ENST00000512505 151 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 AC016727.1-205ENST00000605437 569 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 uc_338.14-201ENST00000613162 166 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 MIR1302-1-201ENST00000637932 143 ntBASIC1.76□□□□□ -2.13
CKAP4Q07065 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
CKAP4Q07065 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.76□□□□□ -2.13
CKAP4Q07065 RBBP8P1-201ENST00000449447 1844 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CKAP4Q07065 RNU6-858P-201ENST00000362436 107 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 Y_RNA.61-201ENST00000362835 102 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 Y_RNA.151-201ENST00000363566 112 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 RNU6-1317P-201ENST00000364582 104 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 RNU6-596P-201ENST00000365395 98 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 MIR517A-201ENST00000385001 87 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 RNU6-293P-201ENST00000411259 106 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 AP000275.1-201ENST00000411943 390 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.75□□□□□ -2.13
CKAP4Q07065 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 AL591043.1-201ENST00000432461 424 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.75□□□□□ -2.13
CKAP4Q07065 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.75□□□□□ -2.13
CKAP4Q07065 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.75□□□□□ -2.13
CKAP4Q07065 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.75□□□□□ -2.13
CKAP4Q07065 SNORD5.1-201ENST00000458800 75 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 Y_RNA.635-201ENST00000459041 101 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 RPL9P9-202ENST00000466501 579 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 AC026782.1-201ENST00000512952 449 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.75□□□□□ -2.13
CKAP4Q07065 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.75□□□□□ -2.13
CKAP4Q07065 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.75□□□□□ -2.13
CKAP4Q07065 AL355375.2-201ENST00000574825 175 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 AP001836.1-201ENST00000604675 523 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.75□□□□□ -2.13
CKAP4Q07065 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CKAP4Q07065 RNU4-79P-201ENST00000362764 141 ntBASIC1.74□□□□□ -2.13
CKAP4Q07065 SNORD56.1-201ENST00000362913 68 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms