Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR208B-201ENST00000401172 77 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 AC099548.1-201ENST00000421443 426 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 MTND4LP9-201ENST00000427694 174 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 AL137159.1-201ENST00000452808 512 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 AC114982.1-201ENST00000469402 321 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.85□□□□□ -1.79
SOX4Q06945 RN7SKP164-201ENST00000516138 266 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 RNU6-971P-201ENST00000516920 106 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 ACA59.2-201ENST00000517061 156 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.85□□□□□ -1.79
SOX4Q06945 AC022616.8-201ENST00000533569 253 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 MIR3944-201ENST00000581277 108 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 MIR4744-201ENST00000581563 82 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 AL359881.1-201ENST00000602916 267 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 AL078604.3-201ENST00000615580 211 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 MIR7975-201ENST00000619350 68 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 MIR4727-201ENST00000622232 55 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 SNORD98-201ENST00000636377 67 ntBASIC3.85□□□□□ -1.79
SOX4Q06945 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SOX4Q06945 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SOX4Q06945 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
SOX4Q06945 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX4Q06945 RNU6-50P-201ENST00000362356 103 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 Y_RNA.127-201ENST00000363386 109 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 RNU4-11P-201ENST00000365287 132 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 RNU6-578P-201ENST00000390980 103 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 MIR1183-201ENST00000408856 89 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 RPL30P13-201ENST00000418873 348 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX4Q06945 BPY2DP-201ENST00000422208 265 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 PRSS3P4-201ENST00000453323 162 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 AC025518.1-201ENST00000479856 347 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 AC103975.1-201ENST00000482506 483 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 SNORA25.12-201ENST00000516202 82 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 RNU6-928P-201ENST00000516876 104 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 AC136628.3-201ENST00000521868 290 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX4Q06945 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.84□□□□□ -1.79
SOX4Q06945 AL162713.1-201ENST00000604480 262 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 AC069294.1-201ENST00000608397 350 ntBASIC3.84□□□□□ -1.79
SOX4Q06945 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.84□□□□□ -1.79
SOX4Q06945 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SOX4Q06945 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SOX4Q06945 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.84□□□□□ -1.8
SOX4Q06945 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SOX4Q06945 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SOX4Q06945 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
SOX4Q06945 Y_RNA.71-201ENST00000362892 104 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 RNU6-103P-201ENST00000363686 107 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 Y_RNA.218-201ENST00000364218 104 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 RNU6-454P-201ENST00000364292 107 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 RNU6-1264P-201ENST00000383891 107 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 RNU6-44P-201ENST00000384045 107 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 MIR513C-201ENST00000401352 84 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 U3.44-201ENST00000458938 192 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 AIG1P1-201ENST00000503376 148 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.83□□□□□ -1.8
SOX4Q06945 RNU6-1333P-201ENST00000516162 93 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 RNU6-107P-201ENST00000516643 102 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 MIR3136-201ENST00000583498 78 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 AC007179.3-201ENST00000604976 235 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 AC005520.5-201ENST00000613926 164 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.83□□□□□ -1.8
SOX4Q06945 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.83□□□□□ -1.8
SOX4Q06945 AC002543.1-201ENST00000299783 1954 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SOX4Q06945 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SOX4Q06945 AL049781.1-201ENST00000623195 3585 ntBASIC3.83□□□□□ -1.8
SOX4Q06945 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SOX4Q06945 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SOX4Q06945 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.82□□□□□ -1.8
SOX4Q06945 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX4Q06945 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX4Q06945 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SOX4Q06945 RNU4-35P-201ENST00000362588 141 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 RNU6-899P-201ENST00000363947 107 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 snoU2_19.4-201ENST00000364329 80 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 Y_RNA.415-201ENST00000384012 112 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 RNVU1-14-201ENST00000384770 164 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 SNORA26.5-201ENST00000391215 123 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 RNA5SP129-201ENST00000410276 118 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.82□□□□□ -1.8
SOX4Q06945 AL035461.1-201ENST00000421490 332 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 AL135790.2-201ENST00000437701 267 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 CYCSP35-201ENST00000451978 304 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.82□□□□□ -1.8
SOX4Q06945 AC107027.2-201ENST00000512197 115 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 RNA5SP468-201ENST00000516782 93 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.82□□□□□ -1.8
SOX4Q06945 AC006199.1-201ENST00000548728 219 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.82□□□□□ -1.8
SOX4Q06945 MIR3923-201ENST00000579521 83 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 DNAJC19P2-201ENST00000593340 302 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 AC013791.1-201ENST00000616619 62 ntBASIC3.82□□□□□ -1.8
SOX4Q06945 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SOX4Q06945 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SOX4Q06945 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.82□□□□□ -1.8
SOX4Q06945 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms