Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 SNORA62.5-201ENST00000516634 120 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 MTND2P7-201ENST00000521337 640 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 AC012507.3-201ENST00000603556 477 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 RAC1P9-201ENST00000604990 392 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 PRELID3BP2-201ENST00000605362 201 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 AC097065.2-201ENST00000608159 533 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 AL354696.1-201ENST00000614652 497 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 7SK.10-201ENST00000621414 298 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 TTK-211ENST00000627129 240 ntTSL 5 BASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 AC010487.4-201ENST00000637027 61 ntBASIC-0.03□□□□□ -2.41
HIST1H1AQ02539 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 Y_RNA.132-201ENST00000363421 102 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 RNU6-236P-201ENST00000363886 106 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 RNU4-76P-201ENST00000364509 141 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 RNY1P8-201ENST00000383970 114 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 RNU6-1110P-201ENST00000516462 101 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 RNU6-1098P-201ENST00000516772 96 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 AC024995.1-201ENST00000523014 93 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 AC011195.1-201ENST00000578177 177 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 MTND1P15-201ENST00000579262 949 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 VN1R87P-201ENST00000596706 487 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 LARP7P1-201ENST00000605576 316 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 AC026741.1-201ENST00000605892 482 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 AC104073.3-201ENST00000610942 955 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 RMST_7.1-201ENST00000621935 268 ntBASIC-0.04□□□□□ -2.42
HIST1H1AQ02539 RNU6-78P-201ENST00000362897 107 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 SNORD44.1-201ENST00000363202 61 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNY1-201ENST00000364228 113 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNU6-777P-201ENST00000364265 104 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNU4-56P-201ENST00000364700 142 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNU4-45P-201ENST00000365469 141 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNU6-354P-201ENST00000383862 107 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNU6-877P-201ENST00000383868 107 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNU6-207P-201ENST00000384137 107 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNU6-793P-201ENST00000384233 104 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNU6-610P-201ENST00000384264 107 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 MIR140-201ENST00000385282 100 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 AC092809.3-201ENST00000415453 231 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 AC092989.1-201ENST00000481235 277 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 AC090049.2-201ENST00000550377 109 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 AC023932.2-201ENST00000603176 175 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 MIR6718-201ENST00000616153 80 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 AC092104.1-201ENST00000497346 1441 ntBASIC-0.05□□□□□ -2.42
HIST1H1AQ02539 RNU1-76P-201ENST00000362903 159 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 SNORA33-201ENST00000363664 130 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 RNU6-468P-201ENST00000384003 109 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 RNA5SP109-201ENST00000391010 116 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 CALM2P3-201ENST00000400429 449 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 AL451046.2-201ENST00000403074 277 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 AL355796.1-201ENST00000406706 323 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 RNA5SP201-201ENST00000410316 124 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 RN7SKP200-201ENST00000410564 320 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 HIGD1AP15-201ENST00000416198 280 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 AC010154.1-201ENST00000425857 269 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 snoU13.18-201ENST00000459483 104 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 AP003327.1-201ENST00000529684 127 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 AL606834.3-201ENST00000602615 496 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 AC026585.1-201ENST00000619582 524 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 AC131159.1-201ENST00000621854 213 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 AC097460.3-201ENST00000623099 442 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 AC103706.2-201ENST00000638080 240 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 BX322639.1-202ENST00000423987 2213 ntBASIC-0.06□□□□□ -2.42
HIST1H1AQ02539 MIR103A1-201ENST00000362165 78 ntBASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 AC245047.8-201ENST00000456455 284 ntBASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 AC109445.1-201ENST00000512356 383 ntBASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 SUB1P2-201ENST00000556401 297 ntBASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 AL390123.1-201ENST00000603216 237 ntBASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 AL136317.1-201ENST00000612653 226 ntBASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 AC093875.1-201ENST00000623688 504 ntBASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 AL603839.4-201ENST00000624658 1005 ntBASIC-0.07□□□□□ -2.42
HIST1H1AQ02539 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 RNU6-384P-201ENST00000364900 104 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 RNY1P4-201ENST00000384595 115 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 RNA5SP219-201ENST00000390940 113 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 RNA5SP504-201ENST00000410676 117 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.08□□□□□ -2.42
HIST1H1AQ02539 MTCO1P27-201ENST00000448269 226 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms