Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MIR29C-201ENST00000385231 88 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 MIR320A-201ENST00000385302 82 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 RNA5SP465-201ENST00000391195 109 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 RN7SKP61-201ENST00000410642 295 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 RNU6-1068P-201ENST00000410958 103 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 VN1R36P-201ENST00000414936 291 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 AL590556.1-201ENST00000423231 483 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 RPL23AP95-201ENST00000426806 265 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 CBX3P6-201ENST00000430257 527 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGCS1Q01581 RNU6-991P-201ENST00000516168 107 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 Y_RNA.693-201ENST00000516641 110 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 RNU6-323P-201ENST00000521915 107 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 AC025423.5-201ENST00000550230 219 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGCS1Q01581 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGCS1Q01581 AL512360.1-201ENST00000555346 234 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.48□□□□□ -2.17
HMGCS1Q01581 AC092807.2-201ENST00000609367 243 ntBASIC1.48□□□□□ -2.17
HMGCS1Q01581 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.48□□□□□ -2.17
HMGCS1Q01581 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HMGCS1Q01581 AP000560.1-201ENST00000624150 1937 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 Y_RNA.167-201ENST00000363735 109 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 RNU6-82P-201ENST00000363970 107 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 RNU4-24P-201ENST00000364565 139 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 RNU6-234P-201ENST00000365229 104 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 Y_RNA.436-201ENST00000384097 102 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 SNORD14D-201ENST00000384390 87 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 Y_RNA.517-201ENST00000384551 106 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 MIR597-201ENST00000384968 97 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 EIF4EP2-201ENST00000422816 654 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AC078809.1-201ENST00000427601 140 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AL133396.1-201ENST00000432048 687 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 MTCO2P3-201ENST00000442543 421 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.47□□□□□ -2.17
HMGCS1Q01581 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AC019235.1-201ENST00000503847 207 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AP005660.1-201ENST00000522972 293 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AC104576.1-201ENST00000524225 88 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.47□□□□□ -2.17
HMGCS1Q01581 MIR4285-201ENST00000581001 85 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 MIR3136-201ENST00000583498 78 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 MIR5692C1-201ENST00000585309 91 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 BX248123.2-201ENST00000606318 124 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AL357078.3-201ENST00000607528 618 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AL353997.5-201ENST00000618886 171 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 AC073534.2-201ENST00000620377 381 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 SNORA43.4-201ENST00000629559 138 ntBASIC1.47□□□□□ -2.17
HMGCS1Q01581 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.46□□□□□ -2.18
HMGCS1Q01581 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
HMGCS1Q01581 RNU6-483P-201ENST00000384088 108 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 RNA5SP213-201ENST00000391031 106 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 AL033519.2-201ENST00000403958 392 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 SRIP3-201ENST00000413200 219 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGCS1Q01581 TIMM9P3-201ENST00000428659 274 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGCS1Q01581 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.46□□□□□ -2.18
HMGCS1Q01581 AMD1P1-201ENST00000457220 922 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 RNA5SP57-201ENST00000459463 123 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 AC008834.1-201ENST00000511612 175 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.46□□□□□ -2.18
HMGCS1Q01581 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGCS1Q01581 AC109446.1-201ENST00000566172 220 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 AF250324.2-201ENST00000608299 610 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 AL359757.2-201ENST00000624309 274 ntBASIC1.46□□□□□ -2.18
HMGCS1Q01581 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HMGCS1Q01581 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.46□□□□□ -2.18
HMGCS1Q01581 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
HMGCS1Q01581 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
HMGCS1Q01581 RNU6-378P-201ENST00000384324 107 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 MIR514A2-201ENST00000385131 88 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 MIR514A3-201ENST00000385132 88 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 RNU11-3P-201ENST00000391111 133 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 SNORA26.3-201ENST00000391119 136 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 MIR934-201ENST00000401241 83 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 MTCYBP2-201ENST00000407745 171 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 RNA5SP201-201ENST00000410316 124 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 AP000275.1-201ENST00000411943 390 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 MTND1P1-201ENST00000445453 368 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC245102.2-201ENST00000448956 180 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 HMGN2P18-201ENST00000450680 270 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 RNU6-1208P-201ENST00000459588 107 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC083904.1-201ENST00000487828 231 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 Y_RNA.654-201ENST00000497848 106 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC008628.2-201ENST00000502605 298 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC016632.1-201ENST00000503994 196 ntBASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.45□□□□□ -2.18
HMGCS1Q01581 AC245505.1-201ENST00000556398 224 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms