Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA4P78363 MTCO3P43-201ENST00000440974 771 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 RPS29P8-201ENST00000445109 171 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.18□□□□□ -2.38
ABCA4P78363 AC016717.1-201ENST00000448918 286 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 MTND2P30-201ENST00000456663 382 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 AC093899.1-201ENST00000457984 376 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA4P78363 RNU6-953P-201ENST00000459154 107 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 AC002350.1-201ENST00000490759 375 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.18□□□□□ -2.38
ABCA4P78363 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 AC022432.1-201ENST00000595739 310 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
ABCA4P78363 SNORD31B-201ENST00000364977 69 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 RNU5E-7P-201ENST00000365290 117 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.18□□□□□ -2.38
ABCA4P78363 AL365338.1-201ENST00000422282 858 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.18□□□□□ -2.38
ABCA4P78363 ART2BP-201ENST00000453501 499 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 snoU109.2-201ENST00000459316 135 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 RPL39P36-201ENST00000490784 156 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
ABCA4P78363 SNORD79.1-201ENST00000516069 84 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 MIR5093-201ENST00000583199 100 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 AC008147.4-201ENST00000617570 1204 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.18□□□□□ -2.38
ABCA4P78363 CASC19-280ENST00000642102 1351 ntBASIC0.18□□□□□ -2.38
ABCA4P78363 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.17□□□□□ -2.38
ABCA4P78363 RNU6-1123P-201ENST00000362347 106 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 snoU2-30.2-201ENST00000362805 70 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 RNU6-1184P-201ENST00000384588 108 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 RNU6-950P-201ENST00000384651 107 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 SNORD89-201ENST00000390981 114 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 RPS3AP1-201ENST00000413190 320 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.17□□□□□ -2.38
ABCA4P78363 snoU13.30-201ENST00000458951 104 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 BET1P1-201ENST00000482276 359 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.17□□□□□ -2.38
ABCA4P78363 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.17□□□□□ -2.38
ABCA4P78363 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.17□□□□□ -2.38
ABCA4P78363 MIR5190-201ENST00000581537 80 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 AC090186.1-201ENST00000605991 572 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.17□□□□□ -2.38
ABCA4P78363 MTND4P14-201ENST00000435799 1354 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.17□□□□□ -2.38
ABCA4P78363 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.17□□□□□ -2.38
ABCA4P78363 AL008629.1-201ENST00000438615 184 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 AL158053.1-201ENST00000441503 453 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 RPL23AP54-201ENST00000495129 419 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 TMF1P1-201ENST00000576058 373 ntBASIC0.17□□□□□ -2.38
ABCA4P78363 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.17□□□□□ -2.38
ABCA4P78363 AC090625.1-201ENST00000357130 210 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 SNORD56.1-201ENST00000362913 68 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 SNORD44.1-201ENST00000363202 61 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 RNU6-46P-201ENST00000383860 107 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 RNU6-946P-201ENST00000383878 107 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 MIR518A1-201ENST00000385068 85 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 SNORA16.2-201ENST00000390991 127 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.16□□□□□ -2.38
ABCA4P78363 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.16□□□□□ -2.38
ABCA4P78363 USP9YP14-201ENST00000430663 563 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 RNU7-90P-201ENST00000459216 62 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 MTCO3P28-201ENST00000513351 515 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.16□□□□□ -2.38
ABCA4P78363 AC109446.1-201ENST00000566172 220 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 Y_RNA.757-201ENST00000578934 114 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 RNU6-88P-201ENST00000606801 100 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 MIR15A-201ENST00000607334 83 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 AL355816.2-201ENST00000610049 647 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 AC103706.2-201ENST00000638080 240 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 RAP1BP3-201ENST00000407180 549 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 AC073261.1-201ENST00000429409 121 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 SUMO2P5-201ENST00000506790 245 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 AC112206.3-201ENST00000514578 389 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 BNIP3P6-201ENST00000549284 499 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.16□□□□□ -2.38
ABCA4P78363 AL353149.1-201ENST00000610667 244 ntBASIC0.16□□□□□ -2.38
ABCA4P78363 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.16□□□□□ -2.38
ABCA4P78363 RNU4-79P-201ENST00000362764 141 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 RNU6-78P-201ENST00000362897 107 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 SNORD114-5-201ENST00000362928 70 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.15□□□□□ -2.39
ABCA4P78363 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.15□□□□□ -2.39
ABCA4P78363 AC016925.1-201ENST00000458303 298 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.15□□□□□ -2.39
ABCA4P78363 RNU6-150P-201ENST00000516237 95 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 AC098483.2-201ENST00000603158 454 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 AC018889.1-201ENST00000605372 397 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 RNU6-212P-201ENST00000362642 104 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 SNORA4.2-201ENST00000365313 147 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 Y_RNA.559-201ENST00000384686 107 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 SNORA12.1-201ENST00000390873 148 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 RNA5SP111-201ENST00000411386 101 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 AC002486.1-201ENST00000435098 391 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 MTCO3P18-201ENST00000440206 761 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 MTCO2P18-201ENST00000457151 658 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 AC093534.1-201ENST00000504977 132 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 MTCO3P9-201ENST00000506989 781 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms