Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AF131216.2-201ENST00000512316 564 ntBASIC0.57□□□□□ -2.32
TPM4P67936 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.57□□□□□ -2.32
TPM4P67936 CYP4A27P-201ENST00000567218 190 ntBASIC0.57□□□□□ -2.32
TPM4P67936 AC016727.2-201ENST00000603988 621 ntBASIC0.57□□□□□ -2.32
TPM4P67936 BNIP3P10-201ENST00000605360 577 ntBASIC0.57□□□□□ -2.32
TPM4P67936 AC016727.1-205ENST00000605437 569 ntBASIC0.57□□□□□ -2.32
TPM4P67936 AC097478.2-201ENST00000610572 514 ntBASIC0.57□□□□□ -2.32
TPM4P67936 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.57□□□□□ -2.32
TPM4P67936 RNU6-545P-201ENST00000362681 104 ntBASIC0.56□□□□□ -2.32
TPM4P67936 snoU2-30.2-201ENST00000362805 70 ntBASIC0.56□□□□□ -2.32
TPM4P67936 Y_RNA.97-201ENST00000363094 102 ntBASIC0.56□□□□□ -2.32
TPM4P67936 SNORD18A-201ENST00000363753 72 ntBASIC0.56□□□□□ -2.32
TPM4P67936 RNU6-17P-201ENST00000384245 107 ntBASIC0.56□□□□□ -2.32
TPM4P67936 RNU6-18P-201ENST00000384527 107 ntBASIC0.56□□□□□ -2.32
TPM4P67936 MED13P1-201ENST00000428342 171 ntBASIC0.56□□□□□ -2.32
TPM4P67936 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.56□□□□□ -2.32
TPM4P67936 AC002486.1-201ENST00000435098 391 ntBASIC0.56□□□□□ -2.32
TPM4P67936 Z73417.1-201ENST00000447373 778 ntBASIC0.56□□□□□ -2.32
TPM4P67936 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.56□□□□□ -2.32
TPM4P67936 MTCO2P29-201ENST00000465212 189 ntBASIC0.56□□□□□ -2.32
TPM4P67936 AC105758.1-201ENST00000506038 399 ntBASIC0.56□□□□□ -2.32
TPM4P67936 RNU6-685P-201ENST00000517088 95 ntBASIC0.56□□□□□ -2.32
TPM4P67936 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.56□□□□□ -2.32
TPM4P67936 DEFB108E-201ENST00000524692 240 ntBASIC0.56□□□□□ -2.32
TPM4P67936 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.56□□□□□ -2.32
TPM4P67936 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.56□□□□□ -2.32
TPM4P67936 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.56□□□□□ -2.32
TPM4P67936 AC109446.2-201ENST00000567872 497 ntBASIC0.56□□□□□ -2.32
TPM4P67936 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.56□□□□□ -2.32
TPM4P67936 Z98751.3-201ENST00000604447 521 ntBASIC0.56□□□□□ -2.32
TPM4P67936 SNORD3E-202ENST00000627253 216 ntBASIC0.56□□□□□ -2.32
TPM4P67936 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.56□□□□□ -2.32
TPM4P67936 MIR6767-201ENST00000637302 66 ntBASIC0.56□□□□□ -2.32
TPM4P67936 RNU6-37P-201ENST00000362692 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-552P-201ENST00000362869 119 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU4-1-201ENST00000363925 141 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-11P-201ENST00000364234 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-25P-201ENST00000383873 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-1-201ENST00000383898 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-48P-201ENST00000384161 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-36P-201ENST00000384172 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-4P-201ENST00000384205 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-5P-201ENST00000384238 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-3P-201ENST00000384314 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-16P-201ENST00000384385 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 SNORA80D-201ENST00000384488 135 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-15P-201ENST00000384534 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-2-201ENST00000384627 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-29P-201ENST00000384637 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-1031P-201ENST00000384773 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-9-201ENST00000384776 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-33P-201ENST00000384793 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 MIR558-201ENST00000384920 94 ntBASIC0.55□□□□□ -2.32
TPM4P67936 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
TPM4P67936 CETN4P-201ENST00000432407 469 ntBASIC0.55□□□□□ -2.32
TPM4P67936 HSFY7P-201ENST00000432672 318 ntBASIC0.55□□□□□ -2.32
TPM4P67936 HSFY8P-201ENST00000437934 318 ntBASIC0.55□□□□□ -2.32
TPM4P67936 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.55□□□□□ -2.32
TPM4P67936 AC116347.2-201ENST00000514912 523 ntBASIC0.55□□□□□ -2.32
TPM4P67936 AC109479.2-201ENST00000517842 174 ntBASIC0.55□□□□□ -2.32
TPM4P67936 ZNF519P3-201ENST00000557158 1032 ntBASIC0.55□□□□□ -2.32
TPM4P67936 AL353765.1-201ENST00000605514 183 ntBASIC0.55□□□□□ -2.32
TPM4P67936 RNU6-6P-201ENST00000606623 107 ntBASIC0.55□□□□□ -2.32
TPM4P67936 GHRLOS.1-201ENST00000610995 70 ntBASIC0.55□□□□□ -2.32
TPM4P67936 AC005520.5-201ENST00000613926 164 ntBASIC0.55□□□□□ -2.32
TPM4P67936 AC005858.4-201ENST00000623191 700 ntBASIC0.55□□□□□ -2.32
TPM4P67936 AL450472.1-202ENST00000637286 180 ntBASIC0.55□□□□□ -2.32
TPM4P67936 AC106858.1-201ENST00000637497 429 ntBASIC0.55□□□□□ -2.32
TPM4P67936 MIR520E-201ENST00000384867 87 ntBASIC0.54□□□□□ -2.32
TPM4P67936 RNA5SP109-201ENST00000391010 116 ntBASIC0.54□□□□□ -2.32
TPM4P67936 MIR300-201ENST00000401138 83 ntBASIC0.54□□□□□ -2.32
TPM4P67936 MTCYBP36-201ENST00000404146 440 ntBASIC0.54□□□□□ -2.32
TPM4P67936 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.54□□□□□ -2.32
TPM4P67936 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.54□□□□□ -2.32
TPM4P67936 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.54□□□□□ -2.32
TPM4P67936 HMGN2P34-201ENST00000437647 269 ntBASIC0.54□□□□□ -2.32
TPM4P67936 RPS24P1-201ENST00000438550 371 ntBASIC0.54□□□□□ -2.32
TPM4P67936 AC016632.1-201ENST00000503994 196 ntBASIC0.54□□□□□ -2.32
TPM4P67936 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.54□□□□□ -2.32
TPM4P67936 TRMT112P2-201ENST00000512910 132 ntBASIC0.54□□□□□ -2.32
TPM4P67936 RNU4-54P-201ENST00000516428 129 ntBASIC0.54□□□□□ -2.32
TPM4P67936 RNU6-567P-201ENST00000516746 107 ntBASIC0.54□□□□□ -2.32
TPM4P67936 RNU6-922P-201ENST00000516753 99 ntBASIC0.54□□□□□ -2.32
TPM4P67936 BNIP3P40-201ENST00000596017 556 ntBASIC0.54□□□□□ -2.32
TPM4P67936 AL031281.1-201ENST00000604049 488 ntBASIC0.54□□□□□ -2.32
TPM4P67936 AC009229.3-201ENST00000608056 282 ntBASIC0.54□□□□□ -2.32
TPM4P67936 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
TPM4P67936 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
TPM4P67936 RNU6-428P-201ENST00000362942 107 ntBASIC0.53□□□□□ -2.32
TPM4P67936 Y_RNA.324-201ENST00000365165 102 ntBASIC0.53□□□□□ -2.32
TPM4P67936 RNU4-12P-201ENST00000365233 139 ntBASIC0.53□□□□□ -2.32
TPM4P67936 RNU6-641P-201ENST00000384006 107 ntBASIC0.53□□□□□ -2.32
TPM4P67936 RNU6-505P-201ENST00000384427 107 ntBASIC0.53□□□□□ -2.32
TPM4P67936 RNU6-809P-201ENST00000384461 107 ntBASIC0.53□□□□□ -2.32
TPM4P67936 RNU6-387P-201ENST00000411331 105 ntBASIC0.53□□□□□ -2.32
TPM4P67936 AC013470.1-201ENST00000453438 462 ntBASIC0.53□□□□□ -2.32
TPM4P67936 RPS26P48-201ENST00000491713 339 ntBASIC0.53□□□□□ -2.32
TPM4P67936 AC034244.1-201ENST00000507687 207 ntBASIC0.53□□□□□ -2.32
TPM4P67936 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
TPM4P67936 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms