Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.26□□□□□ -2.37
VBP1P61758 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.26□□□□□ -2.37
VBP1P61758 SNRPFP3-201ENST00000457792 225 ntBASIC0.26□□□□□ -2.37
VBP1P61758 RPS23P5-201ENST00000495419 428 ntBASIC0.26□□□□□ -2.37
VBP1P61758 AF131216.2-201ENST00000512316 564 ntBASIC0.26□□□□□ -2.37
VBP1P61758 SNORA19.3-201ENST00000516165 130 ntBASIC0.26□□□□□ -2.37
VBP1P61758 EIF4A1P12-201ENST00000551910 141 ntBASIC0.26□□□□□ -2.37
VBP1P61758 AL390123.1-201ENST00000603216 237 ntBASIC0.26□□□□□ -2.37
VBP1P61758 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.26□□□□□ -2.37
VBP1P61758 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.26□□□□□ -2.37
VBP1P61758 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
VBP1P61758 RNU6-37P-201ENST00000362692 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-11P-201ENST00000364234 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-1141P-201ENST00000364520 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-25P-201ENST00000383873 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-1-201ENST00000383898 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-48P-201ENST00000384161 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-36P-201ENST00000384172 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-4P-201ENST00000384205 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-5P-201ENST00000384238 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-3P-201ENST00000384314 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-16P-201ENST00000384385 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-15P-201ENST00000384534 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-2-201ENST00000384627 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-29P-201ENST00000384637 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-950P-201ENST00000384651 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-417P-201ENST00000384712 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-9-201ENST00000384776 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-33P-201ENST00000384793 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-1245P-201ENST00000411130 106 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.25□□□□□ -2.37
VBP1P61758 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.25□□□□□ -2.37
VBP1P61758 HSFY7P-201ENST00000432672 318 ntBASIC0.25□□□□□ -2.37
VBP1P61758 MTND1P32-201ENST00000433043 938 ntBASIC0.25□□□□□ -2.37
VBP1P61758 USP9YP28-201ENST00000435142 589 ntBASIC0.25□□□□□ -2.37
VBP1P61758 HMGN2P34-201ENST00000437647 269 ntBASIC0.25□□□□□ -2.37
VBP1P61758 HSFY8P-201ENST00000437934 318 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RPEP5-201ENST00000441137 268 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AL606662.1-201ENST00000445763 553 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AC016717.1-201ENST00000448918 286 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AL133217.1-201ENST00000450980 425 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU7-21P-201ENST00000459430 62 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AC010587.2-201ENST00000511727 448 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RN7SKP12-201ENST00000516275 143 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU7-51P-201ENST00000516560 62 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AC007834.2-201ENST00000536310 343 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AC090517.1-201ENST00000569307 266 ntBASIC0.25□□□□□ -2.37
VBP1P61758 MIR4781-201ENST00000585250 76 ntBASIC0.25□□□□□ -2.37
VBP1P61758 RNU6-6P-201ENST00000606623 107 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.25□□□□□ -2.37
VBP1P61758 Z69720.2-201ENST00000624755 279 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AL157786.1-207ENST00000627771 695 ntBASIC0.25□□□□□ -2.37
VBP1P61758 AC099786.3-201ENST00000565735 1410 ntBASIC0.24□□□□□ -2.37
VBP1P61758 RNU6-428P-201ENST00000362942 107 ntBASIC0.24□□□□□ -2.37
VBP1P61758 SNORD56.2-201ENST00000363242 71 ntBASIC0.24□□□□□ -2.37
VBP1P61758 RNY1P10-201ENST00000363268 113 ntBASIC0.24□□□□□ -2.37
VBP1P61758 SNORD32A-201ENST00000364805 84 ntBASIC0.24□□□□□ -2.37
VBP1P61758 Y_RNA.287-201ENST00000364853 94 ntBASIC0.24□□□□□ -2.37
VBP1P61758 SNORA36A-201ENST00000384221 132 ntBASIC0.24□□□□□ -2.37
VBP1P61758 RNU6-39P-201ENST00000384344 107 ntBASIC0.24□□□□□ -2.37
VBP1P61758 SNORA24.1-201ENST00000384401 135 ntBASIC0.24□□□□□ -2.37
VBP1P61758 SNORA75.2-201ENST00000391138 150 ntBASIC0.24□□□□□ -2.37
VBP1P61758 SNORA75.3-201ENST00000391231 150 ntBASIC0.24□□□□□ -2.37
VBP1P61758 Z82205.1-201ENST00000428456 297 ntBASIC0.24□□□□□ -2.37
VBP1P61758 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.24□□□□□ -2.37
VBP1P61758 AC233266.1-201ENST00000454518 96 ntBASIC0.24□□□□□ -2.37
VBP1P61758 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.24□□□□□ -2.37
VBP1P61758 AC104982.1-201ENST00000478775 574 ntBASIC0.24□□□□□ -2.37
VBP1P61758 HMGB1P29-201ENST00000505659 499 ntBASIC0.24□□□□□ -2.37
VBP1P61758 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.24□□□□□ -2.37
VBP1P61758 RNU6-377P-201ENST00000515965 102 ntBASIC0.24□□□□□ -2.37
VBP1P61758 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.24□□□□□ -2.37
VBP1P61758 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.24□□□□□ -2.37
VBP1P61758 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.24□□□□□ -2.37
VBP1P61758 MIR5697-201ENST00000578045 78 ntBASIC0.24□□□□□ -2.37
VBP1P61758 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
VBP1P61758 AC008521.1-201ENST00000587471 187 ntBASIC0.24□□□□□ -2.37
VBP1P61758 MTND3P19-201ENST00000603825 345 ntBASIC0.24□□□□□ -2.37
VBP1P61758 Z98751.3-201ENST00000604447 521 ntBASIC0.24□□□□□ -2.37
VBP1P61758 AL139286.2-201ENST00000606838 396 ntBASIC0.24□□□□□ -2.37
VBP1P61758 AC242852.1-201ENST00000612151 96 ntBASIC0.24□□□□□ -2.37
VBP1P61758 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.24□□□□□ -2.37
VBP1P61758 AC244015.1-201ENST00000622301 99 ntBASIC0.24□□□□□ -2.37
VBP1P61758 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.24□□□□□ -2.37
VBP1P61758 AL450472.1-202ENST00000637286 180 ntBASIC0.24□□□□□ -2.37
VBP1P61758 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.24□□□□□ -2.37
VBP1P61758 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
VBP1P61758 AC073343.1-201ENST00000328239 651 ntBASIC0.23□□□□□ -2.37
VBP1P61758 snoU2-30.2-201ENST00000362805 70 ntBASIC0.23□□□□□ -2.37
VBP1P61758 Y_RNA.465-201ENST00000384293 102 ntBASIC0.23□□□□□ -2.37
VBP1P61758 SNORD99-201ENST00000408612 74 ntBASIC0.23□□□□□ -2.37
VBP1P61758 AL353777.1-201ENST00000425552 326 ntBASIC0.23□□□□□ -2.37
VBP1P61758 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.23□□□□□ -2.37
VBP1P61758 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.23□□□□□ -2.37
VBP1P61758 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.23□□□□□ -2.37
VBP1P61758 AC091874.1-201ENST00000511402 339 ntBASIC0.23□□□□□ -2.37
VBP1P61758 TRMT112P2-201ENST00000512910 132 ntBASIC0.23□□□□□ -2.37
VBP1P61758 RNU6-1069P-201ENST00000516612 133 ntBASIC0.23□□□□□ -2.37
VBP1P61758 DEFB131C-201ENST00000528817 165 ntBASIC0.23□□□□□ -2.37
VBP1P61758 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms