Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.7□□□□□ -2.3
CLDN12P56749 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-351P-201ENST00000516097 100 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.7□□□□□ -2.3
CLDN12P56749 AC024995.1-201ENST00000523014 93 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC068587.5-201ENST00000528506 175 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC078795.3-201ENST00000602913 472 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC064872.1-201ENST00000604823 1072 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 Z99289.3-201ENST00000605586 594 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-6P-201ENST00000606623 107 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC138749.5-201ENST00000611461 208 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AL139418.1-201ENST00000613613 177 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC106800.4-201ENST00000614905 153 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AC116165.2-201ENST00000616705 206 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 AL133216.2-202ENST00000634512 349 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 BX322639.1-202ENST00000423987 2213 ntBASIC0.7□□□□□ -2.3
CLDN12P56749 RNU6-562P-201ENST00000362731 107 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 RNU6-552P-201ENST00000362869 119 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 SNORD114-27-201ENST00000363766 70 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 RNY1P12-201ENST00000364251 105 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 RNU6-378P-201ENST00000384324 107 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 RNU6-83P-201ENST00000384568 112 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 Y_RNA.576-201ENST00000384781 102 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 MIR200A-201ENST00000384875 90 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 RNU6-1242P-201ENST00000391052 103 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.69□□□□□ -2.3
CLDN12P56749 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN12P56749 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN12P56749 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CLDN12P56749 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN12P56749 RNU6-1146P-201ENST00000516282 102 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 RNU6-165P-201ENST00000517170 99 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.69□□□□□ -2.3
CLDN12P56749 PCMTD1P2-201ENST00000565017 355 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 Z98751.3-201ENST00000604447 521 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 AC104010.1-201ENST00000616889 150 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 AC136475.10-201ENST00000620253 385 ntBASIC0.69□□□□□ -2.3
CLDN12P56749 AL391994.1-201ENST00000254724 282 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 SNORD115-7-201ENST00000365306 82 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 MIR532-201ENST00000385025 91 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AC006461.1-201ENST00000412637 326 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 CDK8P2-201ENST00000415020 547 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AC007283.2-201ENST00000424739 197 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 USP9YP28-201ENST00000435142 589 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 GAPDHP17-201ENST00000449858 1001 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 RNU7-34P-201ENST00000459394 64 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.68□□□□□ -2.3
CLDN12P56749 HMGN1P12-201ENST00000499125 195 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AC008628.2-201ENST00000502605 298 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.68□□□□□ -2.3
CLDN12P56749 HSPE1P23-201ENST00000509838 286 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.68□□□□□ -2.3
CLDN12P56749 AP003181.2-201ENST00000528941 181 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AC090517.1-201ENST00000569307 266 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 MTCO2P2-201ENST00000591258 225 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AC105129.3-201ENST00000605455 485 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 RNU4-5P-201ENST00000607255 135 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.68□□□□□ -2.3
CLDN12P56749 AL607023.1-201ENST00000620045 248 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AC009878.1-201ENST00000621819 340 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 AL049777.1-201ENST00000622740 518 ntBASIC0.68□□□□□ -2.3
CLDN12P56749 RNU4-79P-201ENST00000362764 141 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 SNORA4.2-201ENST00000365313 147 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 RNU6-1054P-201ENST00000411293 104 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.67□□□□□ -2.3
CLDN12P56749 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.67□□□□□ -2.3
CLDN12P56749 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.67□□□□□ -2.3
CLDN12P56749 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.67□□□□□ -2.3
CLDN12P56749 ACA64.5-201ENST00000516207 127 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.67□□□□□ -2.3
CLDN12P56749 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 MIR4509-3-201ENST00000578671 94 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 MIR4742-201ENST00000581069 85 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 MIR4509-2-201ENST00000583920 94 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 AP000811.1-201ENST00000603803 651 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 AC091805.2-201ENST00000603848 235 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 AC008250.2-201ENST00000615261 205 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 MIR4509-1-201ENST00000618224 94 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 AL450472.1-202ENST00000637286 180 ntBASIC0.67□□□□□ -2.3
CLDN12P56749 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.67□□□□□ -2.3
CLDN12P56749 snoU2-30.2-201ENST00000362805 70 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 RNY1P10-201ENST00000363268 113 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 RNU6-501P-201ENST00000364072 100 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 RNU6-660P-201ENST00000364566 109 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 Y_RNA.480-201ENST00000384364 102 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 AL356776.1-201ENST00000406574 447 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 MIR1283-1-201ENST00000408494 87 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 AL117339.3-201ENST00000418733 162 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.66□□□□□ -2.3
CLDN12P56749 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.66□□□□□ -2.3
CLDN12P56749 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.66□□□□□ -2.3
CLDN12P56749 RNU6-948P-201ENST00000516374 107 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 MIR3973-201ENST00000579824 107 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 MIR4999-201ENST00000585029 91 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 AL513534.2-201ENST00000603836 250 ntBASIC0.66□□□□□ -2.3
CLDN12P56749 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.66□□□□□ -2.3
CLDN12P56749 RNU6-116P-201ENST00000384042 109 ntBASIC0.65□□□□□ -2.31
CLDN12P56749 RNU6-1235P-201ENST00000384559 107 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms