Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR302D-201ENST00000362275 68 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 RNU4-91P-201ENST00000364778 135 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 SNORD32A-201ENST00000364805 84 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 SNORD1A-201ENST00000364968 72 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 MIR598-201ENST00000384868 97 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 MIR454-201ENST00000390180 115 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 RNU6-360P-201ENST00000390944 104 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 RNU4-46P-201ENST00000410818 138 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.16□□□□□ -2.22
CLDN6P56747 Z99497.1-201ENST00000421282 135 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AL596276.1-201ENST00000434465 418 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.16□□□□□ -2.22
CLDN6P56747 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.16□□□□□ -2.22
CLDN6P56747 AC013470.1-201ENST00000453438 462 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 snoU13.30-201ENST00000458951 104 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AC098862.1-201ENST00000504991 413 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AC079140.2-201ENST00000506193 142 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 RNU6-1098P-201ENST00000516772 96 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AC019176.1-201ENST00000518519 225 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.16□□□□□ -2.22
CLDN6P56747 AC068338.1-201ENST00000565567 176 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 MIR4775-201ENST00000581168 75 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 MTATP6P3-201ENST00000581686 676 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 VN1R107P-201ENST00000601784 209 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AC008945.2-201ENST00000606056 604 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AC092354.1-201ENST00000606057 376 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 PCGEM1.1-201ENST00000613431 131 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 AC068787.1-201ENST00000623908 691 ntBASIC1.16□□□□□ -2.22
CLDN6P56747 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLDN6P56747 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.15□□□□□ -2.22
CLDN6P56747 Y_RNA.205-201ENST00000364128 113 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 SNORD31B-201ENST00000364977 69 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 RNU6-1029P-201ENST00000384109 107 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 RNU6-74P-201ENST00000384235 107 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 RNU6-1026P-201ENST00000384465 108 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 MIR548B-201ENST00000385247 97 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 RPS29P13-201ENST00000402041 169 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 HIGD1AP15-201ENST00000416198 280 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 RPS27P16-201ENST00000425758 201 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.15□□□□□ -2.23
CLDN6P56747 C8orf59P1-201ENST00000429930 303 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 SNAP23P1-201ENST00000433229 246 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AC099677.2-201ENST00000436385 175 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AL121601.2-201ENST00000438019 707 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 PRPS1P1-201ENST00000445305 876 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.15□□□□□ -2.23
CLDN6P56747 RPS29P15-201ENST00000458329 171 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AC016632.1-201ENST00000503994 196 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.15□□□□□ -2.23
CLDN6P56747 AK3P2-201ENST00000507976 429 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.15□□□□□ -2.23
CLDN6P56747 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.15□□□□□ -2.23
CLDN6P56747 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.15□□□□□ -2.23
CLDN6P56747 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.15□□□□□ -2.23
CLDN6P56747 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.15□□□□□ -2.23
CLDN6P56747 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.15□□□□□ -2.23
CLDN6P56747 MIR98-201ENST00000606724 119 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AC136475.10-201ENST00000620253 385 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AC022418.1-201ENST00000624118 445 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 AC010615.1-201ENST00000594254 1764 ntBASIC1.15□□□□□ -2.23
CLDN6P56747 RNU6-862P-201ENST00000362804 105 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 RNU6-552P-201ENST00000362869 119 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 RNU6-378P-201ENST00000384324 107 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 Y_RNA.560-201ENST00000384689 102 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 SNORA26.3-201ENST00000391119 136 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 AL117339.3-201ENST00000418733 162 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.14□□□□□ -2.23
CLDN6P56747 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.14□□□□□ -2.23
CLDN6P56747 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN6P56747 AC245047.4-201ENST00000433189 144 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN6P56747 AC027119.1-201ENST00000440877 241 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.14□□□□□ -2.23
CLDN6P56747 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN6P56747 AL133217.1-201ENST00000450980 425 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 MTCO2P6-201ENST00000463134 685 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN6P56747 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN6P56747 SNORD27.1-201ENST00000516319 72 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN6P56747 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.14□□□□□ -2.23
CLDN6P56747 EIF4A1P12-201ENST00000551910 141 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 AC021231.3-201ENST00000558497 370 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.14□□□□□ -2.23
CLDN6P56747 AC005668.1-201ENST00000571142 476 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 MIR3937-201ENST00000580135 106 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 BNIP3P39-201ENST00000601077 554 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 AL356157.2-201ENST00000605122 111 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
CLDN6P56747 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 AC095038.3-201ENST00000634439 195 ntBASIC1.14□□□□□ -2.23
CLDN6P56747 Y_RNA.36-201ENST00000362602 112 ntBASIC1.13□□□□□ -2.23
CLDN6P56747 Y_RNA.255-201ENST00000364581 97 ntBASIC1.13□□□□□ -2.23
CLDN6P56747 RNU6-108P-201ENST00000365558 107 ntBASIC1.13□□□□□ -2.23
CLDN6P56747 SNORA18.2-201ENST00000383865 132 ntBASIC1.13□□□□□ -2.23
CLDN6P56747 Y_RNA.480-201ENST00000384364 102 ntBASIC1.13□□□□□ -2.23
CLDN6P56747 RNU6-393P-201ENST00000384475 107 ntBASIC1.13□□□□□ -2.23
CLDN6P56747 Y_RNA.504-201ENST00000384481 104 ntBASIC1.13□□□□□ -2.23
CLDN6P56747 RNU6-342P-201ENST00000384521 104 ntBASIC1.13□□□□□ -2.23
CLDN6P56747 MIR1-2-201ENST00000384961 85 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms