Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC092807.2-201ENST00000609367 243 ntBASIC1.97□□□□□ -2.09
VCPP55072 AC090517.3-201ENST00000625170 141 ntBASIC1.97□□□□□ -2.09
VCPP55072 MIR1321-201ENST00000637766 79 ntBASIC1.97□□□□□ -2.09
VCPP55072 AC068137.3-201ENST00000639191 341 ntBASIC1.97□□□□□ -2.09
VCPP55072 RNU6-692P-201ENST00000384496 107 ntBASIC1.96□□□□□ -2.1
VCPP55072 RNU6-908P-201ENST00000410160 94 ntBASIC1.96□□□□□ -2.1
VCPP55072 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.96□□□□□ -2.1
VCPP55072 RNU6-1208P-201ENST00000459588 107 ntBASIC1.96□□□□□ -2.1
VCPP55072 RNU6-1069P-201ENST00000516612 133 ntBASIC1.96□□□□□ -2.1
VCPP55072 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.96□□□□□ -2.1
VCPP55072 AL157687.1-201ENST00000554853 619 ntBASIC1.96□□□□□ -2.1
VCPP55072 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
VCPP55072 ELOCP5-201ENST00000604924 333 ntBASIC1.96□□□□□ -2.1
VCPP55072 DISC2.1-201ENST00000612827 205 ntBASIC1.96□□□□□ -2.1
VCPP55072 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.96□□□□□ -2.1
VCPP55072 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.96□□□□□ -2.1
VCPP55072 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VCPP55072 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VCPP55072 OR4G1P-203ENST00000641984 1631 ntBASIC1.95□□□□□ -2.1
VCPP55072 RNU6-1285P-201ENST00000363480 105 ntBASIC1.95□□□□□ -2.1
VCPP55072 Y_RNA.231-201ENST00000364358 102 ntBASIC1.95□□□□□ -2.1
VCPP55072 RNU6-42P-201ENST00000384165 107 ntBASIC1.95□□□□□ -2.1
VCPP55072 MIR9-3-201ENST00000385084 90 ntBASIC1.95□□□□□ -2.1
VCPP55072 AL356432.1-201ENST00000405809 419 ntBASIC1.95□□□□□ -2.1
VCPP55072 AL158823.1-201ENST00000418441 478 ntBASIC1.95□□□□□ -2.1
VCPP55072 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.95□□□□□ -2.1
VCPP55072 AL137159.1-201ENST00000452808 512 ntBASIC1.95□□□□□ -2.1
VCPP55072 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.95□□□□□ -2.1
VCPP55072 AL353752.1-201ENST00000454946 260 ntBASIC1.95□□□□□ -2.1
VCPP55072 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.95□□□□□ -2.1
VCPP55072 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.95□□□□□ -2.1
VCPP55072 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.95□□□□□ -2.1
VCPP55072 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.95□□□□□ -2.1
VCPP55072 AC087854.1-201ENST00000519706 414 ntBASIC1.95□□□□□ -2.1
VCPP55072 AC115990.1-201ENST00000526957 301 ntBASIC1.95□□□□□ -2.1
VCPP55072 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.95□□□□□ -2.1
VCPP55072 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.95□□□□□ -2.1
VCPP55072 RNU6-89P-201ENST00000606519 100 ntBASIC1.95□□□□□ -2.1
VCPP55072 AL121757.2-201ENST00000611223 313 ntBASIC1.95□□□□□ -2.1
VCPP55072 AL773524.1-201ENST00000614065 229 ntBASIC1.95□□□□□ -2.1
VCPP55072 RMST_2.1-201ENST00000617263 136 ntBASIC1.95□□□□□ -2.1
VCPP55072 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.95□□□□□ -2.1
VCPP55072 FER-210ENST00000628534 558 ntTSL 5 BASIC1.95□□□□□ -2.1
VCPP55072 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.95□□□□□ -2.1
VCPP55072 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
VCPP55072 snoU2_19.1-201ENST00000362361 80 ntBASIC1.94□□□□□ -2.1
VCPP55072 Y_RNA.38-201ENST00000362617 102 ntBASIC1.94□□□□□ -2.1
VCPP55072 Y_RNA.167-201ENST00000363735 109 ntBASIC1.94□□□□□ -2.1
VCPP55072 Y_RNA.327-201ENST00000365201 102 ntBASIC1.94□□□□□ -2.1
VCPP55072 RNU6-43P-201ENST00000384302 107 ntBASIC1.94□□□□□ -2.1
VCPP55072 RNU6-1274P-201ENST00000384557 107 ntBASIC1.94□□□□□ -2.1
VCPP55072 SNORD73A-201ENST00000386062 65 ntBASIC1.94□□□□□ -2.1
VCPP55072 SNORA40.19-201ENST00000390846 128 ntBASIC1.94□□□□□ -2.1
VCPP55072 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.94□□□□□ -2.1
VCPP55072 MTCO1P20-201ENST00000425366 358 ntBASIC1.94□□□□□ -2.1
VCPP55072 SNAP23P1-201ENST00000433229 246 ntBASIC1.94□□□□□ -2.1
VCPP55072 ERLEC1P1-201ENST00000433806 578 ntBASIC1.94□□□□□ -2.1
VCPP55072 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.94□□□□□ -2.1
VCPP55072 MTCO2P3-201ENST00000442543 421 ntBASIC1.94□□□□□ -2.1
VCPP55072 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VCPP55072 AC107393.1-201ENST00000512403 346 ntBASIC1.94□□□□□ -2.1
VCPP55072 RNU5F-2P-201ENST00000516066 82 ntBASIC1.94□□□□□ -2.1
VCPP55072 RNU6-323P-201ENST00000521915 107 ntBASIC1.94□□□□□ -2.1
VCPP55072 AC087441.2-201ENST00000529141 262 ntBASIC1.94□□□□□ -2.1
VCPP55072 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.94□□□□□ -2.1
VCPP55072 AC010525.2-201ENST00000590920 195 ntBASIC1.94□□□□□ -2.1
VCPP55072 AL357078.3-201ENST00000607528 618 ntBASIC1.94□□□□□ -2.1
VCPP55072 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.94□□□□□ -2.1
VCPP55072 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.94□□□□□ -2.1
VCPP55072 AC233981.2-201ENST00000611524 1614 ntBASIC1.94□□□□□ -2.1
VCPP55072 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
VCPP55072 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
VCPP55072 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
VCPP55072 RNY3P3-201ENST00000363816 102 ntBASIC1.93□□□□□ -2.1
VCPP55072 RNU6-1090P-201ENST00000364065 94 ntBASIC1.93□□□□□ -2.1
VCPP55072 RNU6-1141P-201ENST00000364520 107 ntBASIC1.93□□□□□ -2.1
VCPP55072 Y_RNA.516-201ENST00000384541 124 ntBASIC1.93□□□□□ -2.1
VCPP55072 Y_RNA.554-201ENST00000384672 102 ntBASIC1.93□□□□□ -2.1
VCPP55072 RNU6-1106P-201ENST00000390845 107 ntBASIC1.93□□□□□ -2.1
VCPP55072 EIF4E2P1-201ENST00000393781 255 ntBASIC1.93□□□□□ -2.1
VCPP55072 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.93□□□□□ -2.1
VCPP55072 SNRPGP7-201ENST00000469016 106 ntBASIC1.93□□□□□ -2.1
VCPP55072 RPS29P11-201ENST00000496507 171 ntBASIC1.93□□□□□ -2.1
VCPP55072 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.93□□□□□ -2.1
VCPP55072 SNORA19.2-201ENST00000516013 114 ntBASIC1.93□□□□□ -2.1
VCPP55072 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
VCPP55072 RNU6-667P-201ENST00000517186 102 ntBASIC1.93□□□□□ -2.1
VCPP55072 RN7SKP256-201ENST00000517201 314 ntBASIC1.93□□□□□ -2.1
VCPP55072 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.93□□□□□ -2.1
VCPP55072 AP005639.2-201ENST00000527592 928 ntBASIC1.93□□□□□ -2.1
VCPP55072 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.93□□□□□ -2.1
VCPP55072 ZNF519P2-201ENST00000557032 169 ntBASIC1.93□□□□□ -2.1
VCPP55072 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.93□□□□□ -2.1
VCPP55072 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.93□□□□□ -2.1
VCPP55072 TPRKBP2-201ENST00000565969 475 ntBASIC1.93□□□□□ -2.1
VCPP55072 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.93□□□□□ -2.1
VCPP55072 MIR5692C1-201ENST00000585309 91 ntBASIC1.93□□□□□ -2.1
VCPP55072 SNRPGP17-201ENST00000603780 214 ntBASIC1.93□□□□□ -2.1
VCPP55072 MIR6779-201ENST00000617283 64 ntBASIC1.93□□□□□ -2.1
VCPP55072 AC068137.4-201ENST00000638485 296 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms