Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.23□□□□□ -2.05
PDX1P52945 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.23□□□□□ -2.05
PDX1P52945 AC026782.1-201ENST00000512952 449 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.23□□□□□ -2.05
PDX1P52945 RNA5SP402-201ENST00000517148 110 ntBASIC2.23□□□□□ -2.05
PDX1P52945 RNU1-54P-201ENST00000517181 120 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
PDX1P52945 MIR5194-201ENST00000582634 120 ntBASIC2.23□□□□□ -2.05
PDX1P52945 MIR5007-201ENST00000583098 95 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AL356157.2-201ENST00000605122 111 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
PDX1P52945 AL137847.3-201ENST00000611521 109 ntBASIC2.23□□□□□ -2.05
PDX1P52945 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.23□□□□□ -2.05
PDX1P52945 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PDX1P52945 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PDX1P52945 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PDX1P52945 AC135776.4-201ENST00000624300 1904 ntBASIC2.23□□□□□ -2.05
PDX1P52945 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PDX1P52945 AC092268.1-201ENST00000342691 405 ntBASIC2.22□□□□□ -2.05
PDX1P52945 RNU4-15P-201ENST00000362613 141 ntBASIC2.22□□□□□ -2.05
PDX1P52945 Y_RNA.142-201ENST00000363491 102 ntBASIC2.22□□□□□ -2.05
PDX1P52945 RNU6-944P-201ENST00000364023 107 ntBASIC2.22□□□□□ -2.05
PDX1P52945 RNU1-91P-201ENST00000364746 163 ntBASIC2.22□□□□□ -2.05
PDX1P52945 RNU6-784P-201ENST00000384330 106 ntBASIC2.22□□□□□ -2.05
PDX1P52945 RNU6-601P-201ENST00000384540 107 ntBASIC2.22□□□□□ -2.05
PDX1P52945 MIR95-201ENST00000385072 81 ntBASIC2.22□□□□□ -2.05
PDX1P52945 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PDX1P52945 RPL37P10-201ENST00000412884 288 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AC078809.1-201ENST00000427601 140 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.22□□□□□ -2.05
PDX1P52945 snoU13.6-201ENST00000458785 104 ntBASIC2.22□□□□□ -2.05
PDX1P52945 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.22□□□□□ -2.05
PDX1P52945 AC114801.2-201ENST00000503825 781 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AC021146.2-201ENST00000504736 556 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.22□□□□□ -2.05
PDX1P52945 AC005741.1-201ENST00000511094 432 ntBASIC2.22□□□□□ -2.05
PDX1P52945 RNU6-277P-201ENST00000516272 106 ntBASIC2.22□□□□□ -2.05
PDX1P52945 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.22□□□□□ -2.05
PDX1P52945 AC007375.1-201ENST00000554513 578 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.22□□□□□ -2.05
PDX1P52945 AC109446.1-201ENST00000566172 220 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AC243960.4-201ENST00000600532 288 ntBASIC2.22□□□□□ -2.05
PDX1P52945 Z98751.3-201ENST00000604447 521 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AL670379.2-201ENST00000604983 252 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AC018889.1-201ENST00000605372 397 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AC018462.2-201ENST00000605375 395 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AC104260.1-201ENST00000616660 539 ntBASIC2.22□□□□□ -2.05
PDX1P52945 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.22□□□□□ -2.05
PDX1P52945 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
PDX1P52945 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PDX1P52945 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
PDX1P52945 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
PDX1P52945 SNORA12-201ENST00000391162 147 ntBASIC2.21□□□□□ -2.06
PDX1P52945 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.21□□□□□ -2.06
PDX1P52945 SNORD5.1-201ENST00000458800 75 ntBASIC2.21□□□□□ -2.06
PDX1P52945 AF186996.7-201ENST00000492781 209 ntBASIC2.21□□□□□ -2.06
PDX1P52945 AC104564.1-201ENST00000493028 407 ntBASIC2.21□□□□□ -2.06
PDX1P52945 Y_RNA.670-201ENST00000516255 105 ntBASIC2.21□□□□□ -2.06
PDX1P52945 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.21□□□□□ -2.06
PDX1P52945 AC015712.3-201ENST00000559380 164 ntBASIC2.21□□□□□ -2.06
PDX1P52945 DEFB122-202ENST00000569013 197 ntBASIC2.21□□□□□ -2.06
PDX1P52945 MIR4446-201ENST00000578505 67 ntBASIC2.21□□□□□ -2.06
PDX1P52945 MIR3136-201ENST00000583498 78 ntBASIC2.21□□□□□ -2.06
PDX1P52945 AC011494.1-201ENST00000596454 237 ntBASIC2.21□□□□□ -2.06
PDX1P52945 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.21□□□□□ -2.06
PDX1P52945 AC016727.1-205ENST00000605437 569 ntBASIC2.21□□□□□ -2.06
PDX1P52945 AC025754.2-201ENST00000606491 432 ntBASIC2.21□□□□□ -2.06
PDX1P52945 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.21□□□□□ -2.06
PDX1P52945 AL132765.2-201ENST00000610812 351 ntBASIC2.21□□□□□ -2.06
PDX1P52945 AC009318.2-201ENST00000610917 651 ntBASIC2.21□□□□□ -2.06
PDX1P52945 Y_RNA.804-201ENST00000615262 101 ntBASIC2.21□□□□□ -2.06
PDX1P52945 MIR5739-201ENST00000619803 80 ntBASIC2.21□□□□□ -2.06
PDX1P52945 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.21□□□□□ -2.06
PDX1P52945 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
PDX1P52945 MTND4P12-201ENST00000498999 1377 ntBASIC2.21□□□□□ -2.06
PDX1P52945 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.2□□□□□ -2.06
PDX1P52945 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDX1P52945 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PDX1P52945 RNU6-1286P-201ENST00000383871 107 ntBASIC2.2□□□□□ -2.06
PDX1P52945 RNU6-968P-201ENST00000384076 107 ntBASIC2.2□□□□□ -2.06
PDX1P52945 SNORA29-201ENST00000384183 140 ntBASIC2.2□□□□□ -2.06
PDX1P52945 SNORA46.1-201ENST00000391069 153 ntBASIC2.2□□□□□ -2.06
PDX1P52945 Y_RNA.594-201ENST00000410373 140 ntBASIC2.2□□□□□ -2.06
PDX1P52945 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.2□□□□□ -2.06
PDX1P52945 SUMO1P4-201ENST00000429430 302 ntBASIC2.2□□□□□ -2.06
PDX1P52945 AL161788.1-201ENST00000441805 169 ntBASIC2.2□□□□□ -2.06
PDX1P52945 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.2□□□□□ -2.06
PDX1P52945 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.2□□□□□ -2.06
PDX1P52945 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.2□□□□□ -2.06
PDX1P52945 AC145146.1-201ENST00000496370 254 ntBASIC2.2□□□□□ -2.06
PDX1P52945 AC022447.4-201ENST00000504053 364 ntBASIC2.2□□□□□ -2.06
PDX1P52945 ACA59.1-201ENST00000515966 143 ntBASIC2.2□□□□□ -2.06
PDX1P52945 SNORA31.11-201ENST00000516528 139 ntBASIC2.2□□□□□ -2.06
PDX1P52945 RNU6-1213P-201ENST00000517075 94 ntBASIC2.2□□□□□ -2.06
PDX1P52945 RNU6-586P-201ENST00000517265 104 ntBASIC2.2□□□□□ -2.06
PDX1P52945 SNRPGP18-201ENST00000553000 214 ntBASIC2.2□□□□□ -2.06
PDX1P52945 AC021231.3-201ENST00000558497 370 ntBASIC2.2□□□□□ -2.06
PDX1P52945 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.2□□□□□ -2.06
PDX1P52945 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms