Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RNU6-89P-201ENST00000606519 100 ntBASIC1.89□□□□□ -2.11
SMSP52788 AC009994.1-201ENST00000606889 253 ntBASIC1.89□□□□□ -2.11
SMSP52788 AL022345.1-201ENST00000607292 135 ntBASIC1.89□□□□□ -2.11
SMSP52788 AL357078.3-201ENST00000607528 618 ntBASIC1.89□□□□□ -2.11
SMSP52788 AC103591.3-201ENST00000608684 209 ntBASIC1.89□□□□□ -2.11
SMSP52788 AC092954.2-201ENST00000609103 430 ntBASIC1.89□□□□□ -2.11
SMSP52788 AC064836.2-201ENST00000609491 462 ntBASIC1.89□□□□□ -2.11
SMSP52788 DUXAP9-208ENST00000622815 614 ntBASIC1.89□□□□□ -2.11
SMSP52788 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SMSP52788 ZNF355P-201ENST00000427301 3216 ntBASIC1.89□□□□□ -2.11
SMSP52788 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
SMSP52788 RNU6-160P-201ENST00000384591 107 ntBASIC1.88□□□□□ -2.11
SMSP52788 U8.13-201ENST00000390842 128 ntBASIC1.88□□□□□ -2.11
SMSP52788 RNU11-3P-201ENST00000391111 133 ntBASIC1.88□□□□□ -2.11
SMSP52788 AL033519.2-201ENST00000403958 392 ntBASIC1.88□□□□□ -2.11
SMSP52788 RNU6-908P-201ENST00000410160 94 ntBASIC1.88□□□□□ -2.11
SMSP52788 AC244636.1-201ENST00000421152 228 ntBASIC1.88□□□□□ -2.11
SMSP52788 AC012306.1-201ENST00000423267 114 ntBASIC1.88□□□□□ -2.11
SMSP52788 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.88□□□□□ -2.11
SMSP52788 AL445646.1-201ENST00000431784 216 ntBASIC1.88□□□□□ -2.11
SMSP52788 ERLEC1P1-201ENST00000433806 578 ntBASIC1.88□□□□□ -2.11
SMSP52788 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.88□□□□□ -2.11
SMSP52788 AL035666.1-201ENST00000446195 348 ntBASIC1.88□□□□□ -2.11
SMSP52788 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.88□□□□□ -2.11
SMSP52788 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.88□□□□□ -2.11
SMSP52788 RNU1-131P-201ENST00000458943 161 ntBASIC1.88□□□□□ -2.11
SMSP52788 U8.21-201ENST00000459536 136 ntBASIC1.88□□□□□ -2.11
SMSP52788 AC114801.2-201ENST00000503825 781 ntBASIC1.88□□□□□ -2.11
SMSP52788 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.88□□□□□ -2.11
SMSP52788 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.88□□□□□ -2.11
SMSP52788 AC025465.4-201ENST00000513422 638 ntBASIC1.88□□□□□ -2.11
SMSP52788 RNA5SP490-201ENST00000517141 136 ntBASIC1.88□□□□□ -2.11
SMSP52788 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.88□□□□□ -2.11
SMSP52788 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.88□□□□□ -2.11
SMSP52788 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.88□□□□□ -2.11
SMSP52788 MIR3935-201ENST00000583472 104 ntBASIC1.88□□□□□ -2.11
SMSP52788 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.88□□□□□ -2.11
SMSP52788 CYP2C61P-201ENST00000604072 290 ntBASIC1.88□□□□□ -2.11
SMSP52788 AC097065.2-201ENST00000608159 533 ntBASIC1.88□□□□□ -2.11
SMSP52788 AL121757.2-201ENST00000611223 313 ntBASIC1.88□□□□□ -2.11
SMSP52788 DISC2.1-201ENST00000612827 205 ntBASIC1.88□□□□□ -2.11
SMSP52788 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
SMSP52788 AL023284.1-201ENST00000403956 276 ntBASIC1.87□□□□□ -2.11
SMSP52788 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.87□□□□□ -2.11
SMSP52788 RPL9P9-202ENST00000466501 579 ntBASIC1.87□□□□□ -2.11
SMSP52788 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
SMSP52788 RNU6-1281P-201ENST00000516223 105 ntBASIC1.87□□□□□ -2.11
SMSP52788 AC025423.5-201ENST00000550230 219 ntBASIC1.87□□□□□ -2.11
SMSP52788 AC109446.1-201ENST00000566172 220 ntBASIC1.87□□□□□ -2.11
SMSP52788 BNIP3P25-201ENST00000596023 559 ntBASIC1.87□□□□□ -2.11
SMSP52788 AP000942.3-201ENST00000603702 160 ntBASIC1.87□□□□□ -2.11
SMSP52788 MIR1321-201ENST00000637766 79 ntBASIC1.87□□□□□ -2.11
SMSP52788 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
SMSP52788 OR4G1P-203ENST00000641984 1631 ntBASIC1.87□□□□□ -2.11
SMSP52788 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMSP52788 AC009541.1-201ENST00000438279 2662 ntBASIC1.86□□□□□ -2.11
SMSP52788 Y_RNA.238-201ENST00000364441 102 ntBASIC1.86□□□□□ -2.11
SMSP52788 RNU6-214P-201ENST00000384130 107 ntBASIC1.86□□□□□ -2.11
SMSP52788 RNU6-378P-201ENST00000384324 107 ntBASIC1.86□□□□□ -2.11
SMSP52788 RNU2-40P-201ENST00000410833 196 ntBASIC1.86□□□□□ -2.11
SMSP52788 RNU6-1068P-201ENST00000410958 103 ntBASIC1.86□□□□□ -2.11
SMSP52788 MTCO3P41-201ENST00000414801 328 ntBASIC1.86□□□□□ -2.11
SMSP52788 AC123900.1-201ENST00000420390 96 ntBASIC1.86□□□□□ -2.11
SMSP52788 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.86□□□□□ -2.11
SMSP52788 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.86□□□□□ -2.11
SMSP52788 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.86□□□□□ -2.11
SMSP52788 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.86□□□□□ -2.11
SMSP52788 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.86□□□□□ -2.11
SMSP52788 AC108729.3-201ENST00000513484 108 ntBASIC1.86□□□□□ -2.11
SMSP52788 MIR449C-201ENST00000516047 92 ntBASIC1.86□□□□□ -2.11
SMSP52788 AC022254.1-201ENST00000567857 235 ntBASIC1.86□□□□□ -2.11
SMSP52788 CPDP1-201ENST00000579660 283 ntBASIC1.86□□□□□ -2.11
SMSP52788 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.86□□□□□ -2.11
SMSP52788 AC015540.1-201ENST00000615828 501 ntBASIC1.86□□□□□ -2.11
SMSP52788 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
SMSP52788 FER-210ENST00000628534 558 ntTSL 5 BASIC1.86□□□□□ -2.11
SMSP52788 AC099654.12-201ENST00000639868 649 ntBASIC1.86□□□□□ -2.11
SMSP52788 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.86□□□□□ -2.11
SMSP52788 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SMSP52788 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
SMSP52788 AC233981.2-201ENST00000611524 1614 ntBASIC1.85□□□□□ -2.11
SMSP52788 RNU1-76P-201ENST00000362903 159 ntBASIC1.85□□□□□ -2.11
SMSP52788 RNU6-623P-201ENST00000363143 105 ntBASIC1.85□□□□□ -2.11
SMSP52788 RNA5SP493-201ENST00000364115 91 ntBASIC1.85□□□□□ -2.11
SMSP52788 RNU6-483P-201ENST00000384088 108 ntBASIC1.85□□□□□ -2.11
SMSP52788 Y_RNA.517-201ENST00000384551 106 ntBASIC1.85□□□□□ -2.11
SMSP52788 RNA5SP247-201ENST00000411181 105 ntBASIC1.85□□□□□ -2.11
SMSP52788 RPS26P42-201ENST00000413485 326 ntBASIC1.85□□□□□ -2.11
SMSP52788 AC021146.2-201ENST00000504736 556 ntBASIC1.85□□□□□ -2.11
SMSP52788 AC092436.3-201ENST00000511788 257 ntBASIC1.85□□□□□ -2.11
SMSP52788 RNU6-506P-201ENST00000516553 94 ntBASIC1.85□□□□□ -2.11
SMSP52788 MIR3169-201ENST00000578032 83 ntBASIC1.85□□□□□ -2.11
SMSP52788 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
SMSP52788 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.85□□□□□ -2.11
SMSP52788 FAM157A-202ENST00000615155 405 ntBASIC1.85□□□□□ -2.11
SMSP52788 AC098657.3-201ENST00000620434 263 ntBASIC1.85□□□□□ -2.11
SMSP52788 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.85□□□□□ -2.11
SMSP52788 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
SMSP52788 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SMSP52788 LINC02555-201ENST00000563933 1951 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms