Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 HMGN2P38-201ENST00000423806 265 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AL133396.1-201ENST00000432048 687 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.38□□□□□ -2.03
CLK1P49759 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.38□□□□□ -2.03
CLK1P49759 MIR2053-201ENST00000459295 91 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RPL23AP45-201ENST00000476406 468 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AL163540.1-201ENST00000485382 386 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.38□□□□□ -2.03
CLK1P49759 MRPS17P9-201ENST00000511924 393 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNA5SP384-201ENST00000516615 116 ntBASIC2.38□□□□□ -2.03
CLK1P49759 CPDP1-201ENST00000579660 283 ntBASIC2.38□□□□□ -2.03
CLK1P49759 MIR5092-201ENST00000583139 88 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AC078795.3-201ENST00000602913 472 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AL121917.1-203ENST00000605534 577 ntBASIC2.38□□□□□ -2.03
CLK1P49759 RNU6-6P-201ENST00000606623 107 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AC040896.1-201ENST00000613819 479 ntBASIC2.38□□□□□ -2.03
CLK1P49759 AC005296.1-201ENST00000616145 209 ntBASIC2.38□□□□□ -2.03
CLK1P49759 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLK1P49759 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLK1P49759 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CLK1P49759 RNU6-858P-201ENST00000362436 107 ntBASIC2.37□□□□□ -2.03
CLK1P49759 U8.8-201ENST00000365399 135 ntBASIC2.37□□□□□ -2.03
CLK1P49759 SNORA33.2-201ENST00000365413 134 ntBASIC2.37□□□□□ -2.03
CLK1P49759 SNORA22B-201ENST00000383876 138 ntBASIC2.37□□□□□ -2.03
CLK1P49759 RNU6-738P-201ENST00000384531 106 ntBASIC2.37□□□□□ -2.03
CLK1P49759 MIR518D-201ENST00000385014 87 ntBASIC2.37□□□□□ -2.03
CLK1P49759 NDUFB4P4-201ENST00000404822 243 ntBASIC2.37□□□□□ -2.03
CLK1P49759 RNU6-325P-201ENST00000411132 105 ntBASIC2.37□□□□□ -2.03
CLK1P49759 AC243428.1-201ENST00000421099 264 ntBASIC2.37□□□□□ -2.03
CLK1P49759 AC018865.2-201ENST00000423631 129 ntBASIC2.37□□□□□ -2.03
CLK1P49759 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.37□□□□□ -2.03
CLK1P49759 AC011816.1-201ENST00000441346 546 ntBASIC2.37□□□□□ -2.03
CLK1P49759 HIGD1AP2-201ENST00000446367 280 ntBASIC2.37□□□□□ -2.03
CLK1P49759 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.37□□□□□ -2.03
CLK1P49759 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.37□□□□□ -2.03
CLK1P49759 SNRPGP18-201ENST00000553000 214 ntBASIC2.37□□□□□ -2.03
CLK1P49759 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.37□□□□□ -2.03
CLK1P49759 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.37□□□□□ -2.03
CLK1P49759 AC092608.2-201ENST00000624427 218 ntBASIC2.37□□□□□ -2.03
CLK1P49759 AC006386.2-201ENST00000624491 75 ntBASIC2.37□□□□□ -2.03
CLK1P49759 AC012005.1-201ENST00000624575 75 ntBASIC2.37□□□□□ -2.03
CLK1P49759 MIR3529-201ENST00000637713 78 ntBASIC2.37□□□□□ -2.03
CLK1P49759 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLK1P49759 AC007336.1-201ENST00000576365 3828 ntBASIC2.37□□□□□ -2.03
CLK1P49759 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLK1P49759 RNU1-72P-201ENST00000362976 153 ntBASIC2.36□□□□□ -2.03
CLK1P49759 Y_RNA.463-201ENST00000384271 102 ntBASIC2.36□□□□□ -2.03
CLK1P49759 MIR606-201ENST00000384851 96 ntBASIC2.36□□□□□ -2.03
CLK1P49759 AL133475.1-201ENST00000404414 305 ntBASIC2.36□□□□□ -2.03
CLK1P49759 RNA5SP184-201ENST00000411071 108 ntBASIC2.36□□□□□ -2.03
CLK1P49759 RNU6-293P-201ENST00000411259 106 ntBASIC2.36□□□□□ -2.03
CLK1P49759 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.36□□□□□ -2.03
CLK1P49759 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.36□□□□□ -2.03
CLK1P49759 AL353689.1-201ENST00000438895 199 ntBASIC2.36□□□□□ -2.03
CLK1P49759 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.36□□□□□ -2.03
CLK1P49759 AC013470.1-201ENST00000453438 462 ntBASIC2.36□□□□□ -2.03
CLK1P49759 SNORD109B-201ENST00000458961 67 ntBASIC2.36□□□□□ -2.03
CLK1P49759 SNORD109A-201ENST00000459128 67 ntBASIC2.36□□□□□ -2.03
CLK1P49759 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
CLK1P49759 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.36□□□□□ -2.03
CLK1P49759 RN7SKP132-201ENST00000516001 208 ntBASIC2.36□□□□□ -2.03
CLK1P49759 RNU6-120P-201ENST00000516077 103 ntBASIC2.36□□□□□ -2.03
CLK1P49759 RNU6-976P-201ENST00000516086 111 ntBASIC2.36□□□□□ -2.03
CLK1P49759 SCARNA16.2-201ENST00000516520 172 ntBASIC2.36□□□□□ -2.03
CLK1P49759 AC034114.1-201ENST00000520293 285 ntBASIC2.36□□□□□ -2.03
CLK1P49759 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.36□□□□□ -2.03
CLK1P49759 AL109918.3-201ENST00000603072 338 ntBASIC2.36□□□□□ -2.03
CLK1P49759 AC073410.2-201ENST00000603240 332 ntBASIC2.36□□□□□ -2.03
CLK1P49759 AL713866.2-201ENST00000603579 219 ntBASIC2.36□□□□□ -2.03
CLK1P49759 AC116312.1-201ENST00000606841 314 ntBASIC2.36□□□□□ -2.03
CLK1P49759 AC019193.3-201ENST00000609144 554 ntBASIC2.36□□□□□ -2.03
CLK1P49759 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CLK1P49759 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.36□□□□□ -2.03
CLK1P49759 AL365361.1-201ENST00000566942 3481 ntBASIC2.35□□□□□ -2.03
CLK1P49759 Y_RNA.28-201ENST00000362554 111 ntBASIC2.35□□□□□ -2.03
CLK1P49759 Y_RNA.148-201ENST00000363557 117 ntBASIC2.35□□□□□ -2.03
CLK1P49759 Y_RNA.202-201ENST00000364083 110 ntBASIC2.35□□□□□ -2.03
CLK1P49759 RNU6-72P-201ENST00000384285 79 ntBASIC2.35□□□□□ -2.03
CLK1P49759 Y_RNA.496-201ENST00000384444 101 ntBASIC2.35□□□□□ -2.03
CLK1P49759 RNU6-331P-201ENST00000384724 107 ntBASIC2.35□□□□□ -2.03
CLK1P49759 RNU6-174P-201ENST00000410406 106 ntBASIC2.35□□□□□ -2.03
CLK1P49759 USMG5P1-201ENST00000425964 177 ntBASIC2.35□□□□□ -2.03
CLK1P49759 DAP3P1-201ENST00000441522 278 ntBASIC2.35□□□□□ -2.03
CLK1P49759 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.35□□□□□ -2.03
CLK1P49759 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.35□□□□□ -2.03
CLK1P49759 RNU6-327P-201ENST00000516270 127 ntBASIC2.35□□□□□ -2.03
CLK1P49759 Y_RNA.687-201ENST00000516558 91 ntBASIC2.35□□□□□ -2.03
CLK1P49759 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.35□□□□□ -2.03
CLK1P49759 AL096840.1-201ENST00000603287 93 ntBASIC2.35□□□□□ -2.03
CLK1P49759 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.35□□□□□ -2.03
CLK1P49759 AC133104.2-201ENST00000615272 193 ntBASIC2.35□□□□□ -2.03
CLK1P49759 PISRT1.1-201ENST00000616930 107 ntBASIC2.35□□□□□ -2.03
CLK1P49759 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.35□□□□□ -2.03
CLK1P49759 AC091925.1-201ENST00000623204 462 ntBASIC2.35□□□□□ -2.03
CLK1P49759 ZNF702P-202ENST00000434269 1966 ntBASIC2.35□□□□□ -2.03
CLK1P49759 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CLK1P49759 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CLK1P49759 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
CLK1P49759 U3.13-201ENST00000364804 214 ntBASIC2.34□□□□□ -2.03
CLK1P49759 RNU6-596P-201ENST00000365395 98 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms