Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.97□□□□□ -2.09
CDX1P47902 AL513124.1-201ENST00000450410 614 ntBASIC1.97□□□□□ -2.09
CDX1P47902 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.97□□□□□ -2.09
CDX1P47902 RNU7-14P-201ENST00000459331 62 ntBASIC1.97□□□□□ -2.09
CDX1P47902 AC069439.1-201ENST00000494739 167 ntBASIC1.97□□□□□ -2.09
CDX1P47902 MTCO2P30-201ENST00000503662 364 ntBASIC1.97□□□□□ -2.09
CDX1P47902 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.97□□□□□ -2.09
CDX1P47902 AP005639.2-201ENST00000527592 928 ntBASIC1.97□□□□□ -2.09
CDX1P47902 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.97□□□□□ -2.09
CDX1P47902 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.97□□□□□ -2.09
CDX1P47902 MIR4435-1-201ENST00000582552 80 ntBASIC1.97□□□□□ -2.09
CDX1P47902 RPL17P51-201ENST00000605218 238 ntBASIC1.97□□□□□ -2.09
CDX1P47902 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.97□□□□□ -2.09
CDX1P47902 AL359314.1-201ENST00000616913 261 ntBASIC1.97□□□□□ -2.09
CDX1P47902 AC009248.2-201ENST00000619826 254 ntBASIC1.97□□□□□ -2.09
CDX1P47902 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.97□□□□□ -2.09
CDX1P47902 AC243829.7-201ENST00000633081 225 ntBASIC1.97□□□□□ -2.09
CDX1P47902 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
CDX1P47902 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.97□□□□□ -2.09
CDX1P47902 AC245060.5-201ENST00000610778 3293 ntBASIC1.96□□□□□ -2.1
CDX1P47902 RNU5B-2P-201ENST00000363036 113 ntBASIC1.96□□□□□ -2.1
CDX1P47902 Y_RNA.99-201ENST00000363138 105 ntBASIC1.96□□□□□ -2.1
CDX1P47902 SNORA16B-201ENST00000364674 135 ntBASIC1.96□□□□□ -2.1
CDX1P47902 RNU11-3P-201ENST00000391111 133 ntBASIC1.96□□□□□ -2.1
CDX1P47902 AL355497.1-201ENST00000406262 551 ntBASIC1.96□□□□□ -2.1
CDX1P47902 AL139413.1-201ENST00000421309 217 ntBASIC1.96□□□□□ -2.1
CDX1P47902 MTATP6P13-201ENST00000438531 667 ntBASIC1.96□□□□□ -2.1
CDX1P47902 DAP3P1-201ENST00000441522 278 ntBASIC1.96□□□□□ -2.1
CDX1P47902 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX1P47902 RPS23P5-201ENST00000495419 428 ntBASIC1.96□□□□□ -2.1
CDX1P47902 RNU6-566P-201ENST00000516790 107 ntBASIC1.96□□□□□ -2.1
CDX1P47902 RNU6-1088P-201ENST00000516850 104 ntBASIC1.96□□□□□ -2.1
CDX1P47902 RNA5SP454-201ENST00000517231 127 ntBASIC1.96□□□□□ -2.1
CDX1P47902 AP005660.1-201ENST00000522972 293 ntBASIC1.96□□□□□ -2.1
CDX1P47902 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.96□□□□□ -2.1
CDX1P47902 ANP32BP3-201ENST00000559213 706 ntBASIC1.96□□□□□ -2.1
CDX1P47902 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX1P47902 AC009994.1-201ENST00000606889 253 ntBASIC1.96□□□□□ -2.1
CDX1P47902 AL022345.1-201ENST00000607292 135 ntBASIC1.96□□□□□ -2.1
CDX1P47902 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.96□□□□□ -2.1
CDX1P47902 AC084782.3-201ENST00000612282 578 ntBASIC1.96□□□□□ -2.1
CDX1P47902 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CDX1P47902 AC130454.1-201ENST00000622948 401 ntBASIC1.96□□□□□ -2.1
CDX1P47902 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CDX1P47902 ZNF658B-202ENST00000615961 3375 ntBASIC1.96□□□□□ -2.1
CDX1P47902 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CDX1P47902 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.95□□□□□ -2.1
CDX1P47902 RNA5SP456-201ENST00000364002 114 ntBASIC1.95□□□□□ -2.1
CDX1P47902 RNU6-1026P-201ENST00000384465 108 ntBASIC1.95□□□□□ -2.1
CDX1P47902 RNU6-306P-201ENST00000384617 107 ntBASIC1.95□□□□□ -2.1
CDX1P47902 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX1P47902 AL139396.1-201ENST00000421137 167 ntBASIC1.95□□□□□ -2.1
CDX1P47902 BX510359.4-201ENST00000423750 193 ntBASIC1.95□□□□□ -2.1
CDX1P47902 AC027124.2-201ENST00000428249 105 ntBASIC1.95□□□□□ -2.1
CDX1P47902 AL139415.2-201ENST00000431968 163 ntBASIC1.95□□□□□ -2.1
CDX1P47902 IPO7P1-201ENST00000442031 636 ntBASIC1.95□□□□□ -2.1
CDX1P47902 FTH1P25-201ENST00000447665 469 ntBASIC1.95□□□□□ -2.1
CDX1P47902 FGF7P6-202ENST00000451282 293 ntBASIC1.95□□□□□ -2.1
CDX1P47902 PPP1R2P5-201ENST00000457256 603 ntBASIC1.95□□□□□ -2.1
CDX1P47902 AC018710.1-201ENST00000506509 158 ntBASIC1.95□□□□□ -2.1
CDX1P47902 RNA5SP320-201ENST00000516263 124 ntBASIC1.95□□□□□ -2.1
CDX1P47902 RNU6-358P-201ENST00000516564 75 ntBASIC1.95□□□□□ -2.1
CDX1P47902 RNU6-1098P-201ENST00000516772 96 ntBASIC1.95□□□□□ -2.1
CDX1P47902 RNU1-54P-201ENST00000517181 120 ntBASIC1.95□□□□□ -2.1
CDX1P47902 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX1P47902 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.95□□□□□ -2.1
CDX1P47902 AC026464.5-201ENST00000562497 722 ntBASIC1.95□□□□□ -2.1
CDX1P47902 AC011712.1-201ENST00000588959 234 ntBASIC1.95□□□□□ -2.1
CDX1P47902 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.95□□□□□ -2.1
CDX1P47902 AC137590.2-201ENST00000619709 240 ntBASIC1.95□□□□□ -2.1
CDX1P47902 AL160394.1-201ENST00000624765 724 ntBASIC1.95□□□□□ -2.1
CDX1P47902 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDX1P47902 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CDX1P47902 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
CDX1P47902 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
CDX1P47902 SNORA18.2-201ENST00000383865 132 ntBASIC1.94□□□□□ -2.1
CDX1P47902 AL359511.1-201ENST00000402970 211 ntBASIC1.94□□□□□ -2.1
CDX1P47902 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX1P47902 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX1P47902 AC087477.1-201ENST00000465747 340 ntBASIC1.94□□□□□ -2.1
CDX1P47902 RPL23AP75-201ENST00000491601 451 ntBASIC1.94□□□□□ -2.1
CDX1P47902 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX1P47902 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX1P47902 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.94□□□□□ -2.1
CDX1P47902 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.94□□□□□ -2.1
CDX1P47902 MIR4790-201ENST00000577799 79 ntBASIC1.94□□□□□ -2.1
CDX1P47902 MIR4273-201ENST00000582824 84 ntBASIC1.94□□□□□ -2.1
CDX1P47902 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
CDX1P47902 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.94□□□□□ -2.1
CDX1P47902 MIR6128-201ENST00000615528 109 ntBASIC1.94□□□□□ -2.1
CDX1P47902 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDX1P47902 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CDX1P47902 MTND4P1-201ENST00000457501 1466 ntBASIC1.94□□□□□ -2.1
CDX1P47902 ZNF702P-202ENST00000434269 1966 ntBASIC1.93□□□□□ -2.1
CDX1P47902 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.93□□□□□ -2.1
CDX1P47902 RNA5SP276-201ENST00000362580 94 ntBASIC1.93□□□□□ -2.1
CDX1P47902 SNORD50.1-201ENST00000362987 71 ntBASIC1.93□□□□□ -2.1
CDX1P47902 RNU6-1164P-201ENST00000364428 107 ntBASIC1.93□□□□□ -2.1
CDX1P47902 Y_RNA.301-201ENST00000364990 103 ntBASIC1.93□□□□□ -2.1
CDX1P47902 SNORA67.4-201ENST00000384688 142 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms