Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CHRNA4P43681 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CHRNA4P43681 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CHRNA4P43681 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CHRNA4P43681 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.98□□□□□ -1.77
CHRNA4P43681 SPRR2C-201ENST00000290702 219 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHRNA4P43681 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 RNU6-309P-201ENST00000364573 106 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 Y_RNA.415-201ENST00000384012 112 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 SNORA72-201ENST00000384339 132 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 RNY1P7-201ENST00000384743 110 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 MIR3074-201ENST00000384885 81 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 RNU6-440P-201ENST00000390882 105 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CHRNA4P43681 MIR1278-201ENST00000408753 81 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 AC079780.1-201ENST00000428259 207 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 AC083863.1-201ENST00000438811 231 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.98□□□□□ -1.77
CHRNA4P43681 RPL31P41-201ENST00000477967 372 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 KC877373.1-201ENST00000479066 408 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.98□□□□□ -1.77
CHRNA4P43681 RNU6-703P-201ENST00000516946 107 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 RNU6-1183P-201ENST00000517054 60 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 MIR2116-201ENST00000517221 80 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 LINC00933-203ENST00000559812 219 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 AC015720.1-201ENST00000565251 277 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 AC025946.2-201ENST00000603398 234 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 RNA5SP108-201ENST00000605921 117 ntBASIC3.98□□□□□ -1.77
CHRNA4P43681 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.98□□□□□ -1.77
CHRNA4P43681 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CHRNA4P43681 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.98□□□□□ -1.77
CHRNA4P43681 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CHRNA4P43681 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHRNA4P43681 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CHRNA4P43681 RNU6-508P-201ENST00000363231 103 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 RNU6-1113P-201ENST00000384348 107 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 MIR320B2-201ENST00000408479 138 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 AL117339.2-201ENST00000430475 180 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 AL162151.2-201ENST00000448875 158 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 RPS4XP2-201ENST00000458402 793 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 RPS26P15-201ENST00000488067 348 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 AC026726.1-201ENST00000512859 601 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 RNA5SP395-201ENST00000516567 118 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 RNU6-107P-201ENST00000516643 102 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 RNA5SP291-201ENST00000517222 105 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 AC025647.1-201ENST00000517879 253 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.97□□□□□ -1.77
CHRNA4P43681 AC007012.1-201ENST00000567192 175 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 VN1R85P-201ENST00000601587 426 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 RNA5SP196-201ENST00000625967 102 ntBASIC3.97□□□□□ -1.77
CHRNA4P43681 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHRNA4P43681 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHRNA4P43681 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.97□□□□□ -1.77
CHRNA4P43681 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHRNA4P43681 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
CHRNA4P43681 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.77
CHRNA4P43681 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.96□□□□□ -1.77
CHRNA4P43681 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CHRNA4P43681 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
CHRNA4P43681 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.96□□□□□ -1.77
CHRNA4P43681 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA4P43681 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA4P43681 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CHRNA4P43681 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CHRNA4P43681 RNA5SP515-201ENST00000364570 118 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 RNA5SP125-201ENST00000364843 120 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 RNA5SP283-201ENST00000365604 119 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 NDUFS5P4-201ENST00000412983 318 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.96□□□□□ -1.78
CHRNA4P43681 PPIAP15-201ENST00000479662 484 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 RNA5SP281-201ENST00000516504 135 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 RNU4-60P-201ENST00000517239 135 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 CR383656.8-201ENST00000549046 145 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 AL160236.1-201ENST00000556317 195 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 MIR3921-201ENST00000577308 85 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 AC020895.1-201ENST00000595362 272 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 MIR6500-201ENST00000622700 86 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 LINC02471-203ENST00000641941 4752 ntBASIC3.96□□□□□ -1.78
CHRNA4P43681 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CHRNA4P43681 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.96□□□□□ -1.78
CHRNA4P43681 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
CHRNA4P43681 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.96□□□□□ -1.78
CHRNA4P43681 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA4P43681 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA4P43681 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CHRNA4P43681 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.95□□□□□ -1.78
CHRNA4P43681 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
CHRNA4P43681 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA4P43681 MIR124-3-201ENST00000384866 87 ntBASIC3.95□□□□□ -1.78
CHRNA4P43681 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CHRNA4P43681 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA4P43681 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.95□□□□□ -1.78
CHRNA4P43681 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.95□□□□□ -1.78
CHRNA4P43681 SNRPEP9-201ENST00000436794 238 ntBASIC3.95□□□□□ -1.78
CHRNA4P43681 AL445687.1-201ENST00000439946 251 ntBASIC3.95□□□□□ -1.78
CHRNA4P43681 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.95□□□□□ -1.78
CHRNA4P43681 SNRPGP5-201ENST00000456003 220 ntBASIC3.95□□□□□ -1.78
CHRNA4P43681 RPL26P9-201ENST00000457466 433 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms