Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CCNFP41002 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNFP41002 AC068647.1-201ENST00000489539 2265 ntBASIC3.62□□□□□ -1.83
CCNFP41002 RNU6-1010P-201ENST00000362757 107 ntBASIC3.62□□□□□ -1.83
CCNFP41002 Y_RNA.275-201ENST00000364726 110 ntBASIC3.62□□□□□ -1.83
CCNFP41002 RNU6-245P-201ENST00000384020 107 ntBASIC3.62□□□□□ -1.83
CCNFP41002 SNORA46.1-201ENST00000391069 153 ntBASIC3.62□□□□□ -1.83
CCNFP41002 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.62□□□□□ -1.83
CCNFP41002 U3.39-201ENST00000408569 239 ntBASIC3.62□□□□□ -1.83
CCNFP41002 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNFP41002 AC027124.2-201ENST00000428249 105 ntBASIC3.62□□□□□ -1.83
CCNFP41002 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.62□□□□□ -1.83
CCNFP41002 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNFP41002 AC009237.7-201ENST00000447357 229 ntBASIC3.62□□□□□ -1.83
CCNFP41002 snoU13.22-201ENST00000459428 104 ntBASIC3.62□□□□□ -1.83
CCNFP41002 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.62□□□□□ -1.83
CCNFP41002 AC107393.1-201ENST00000512403 346 ntBASIC3.62□□□□□ -1.83
CCNFP41002 RNU6-155P-201ENST00000516347 100 ntBASIC3.62□□□□□ -1.83
CCNFP41002 MIR3145-201ENST00000580727 82 ntBASIC3.62□□□□□ -1.83
CCNFP41002 AC012493.2-201ENST00000595083 291 ntBASIC3.62□□□□□ -1.83
CCNFP41002 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.62□□□□□ -1.83
CCNFP41002 AL356575.1-201ENST00000603008 283 ntBASIC3.62□□□□□ -1.83
CCNFP41002 AC022441.3-201ENST00000605737 136 ntBASIC3.62□□□□□ -1.83
CCNFP41002 PCGEM1.1-201ENST00000613431 131 ntBASIC3.62□□□□□ -1.83
CCNFP41002 AC006133.1-201ENST00000617106 264 ntBASIC3.62□□□□□ -1.83
CCNFP41002 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCNFP41002 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNFP41002 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
CCNFP41002 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
CCNFP41002 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCNFP41002 snoU2_19.1-201ENST00000362361 80 ntBASIC3.61□□□□□ -1.83
CCNFP41002 Y_RNA.101-201ENST00000363154 102 ntBASIC3.61□□□□□ -1.83
CCNFP41002 Y_RNA.122-201ENST00000363331 96 ntBASIC3.61□□□□□ -1.83
CCNFP41002 RNA5SP139-201ENST00000364340 117 ntBASIC3.61□□□□□ -1.83
CCNFP41002 RNU6-662P-201ENST00000384253 104 ntBASIC3.61□□□□□ -1.83
CCNFP41002 RNU6-1289P-201ENST00000384431 106 ntBASIC3.61□□□□□ -1.83
CCNFP41002 MIR186-201ENST00000384988 86 ntBASIC3.61□□□□□ -1.83
CCNFP41002 RNA5SP475-201ENST00000410568 110 ntBASIC3.61□□□□□ -1.83
CCNFP41002 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNFP41002 AC104332.1-201ENST00000440471 797 ntBASIC3.61□□□□□ -1.83
CCNFP41002 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNFP41002 AC010401.1-201ENST00000463867 348 ntBASIC3.61□□□□□ -1.83
CCNFP41002 RPL7P49-201ENST00000471402 708 ntBASIC3.61□□□□□ -1.83
CCNFP41002 RPL36AP48-201ENST00000485521 314 ntBASIC3.61□□□□□ -1.83
CCNFP41002 SNORA67.7-201ENST00000516664 135 ntBASIC3.61□□□□□ -1.83
CCNFP41002 AC087441.2-201ENST00000529141 262 ntBASIC3.61□□□□□ -1.83
CCNFP41002 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNFP41002 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNFP41002 MIR3158-1-201ENST00000583596 81 ntBASIC3.61□□□□□ -1.83
CCNFP41002 AC008739.3-201ENST00000603262 127 ntBASIC3.61□□□□□ -1.83
CCNFP41002 RNU1-30P-201ENST00000606575 163 ntBASIC3.61□□□□□ -1.83
CCNFP41002 uc_338.14-201ENST00000613162 166 ntBASIC3.61□□□□□ -1.83
CCNFP41002 CR392039.5-201ENST00000623201 510 ntBASIC3.61□□□□□ -1.83
CCNFP41002 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.61□□□□□ -1.83
CCNFP41002 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNFP41002 AC091564.4-201ENST00000533934 2194 ntBASIC3.61□□□□□ -1.83
CCNFP41002 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNFP41002 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CCNFP41002 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNFP41002 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNFP41002 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNFP41002 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.6□□□□□ -1.83
CCNFP41002 RNU6-655P-201ENST00000362858 107 ntBASIC3.6□□□□□ -1.83
CCNFP41002 Y_RNA.415-201ENST00000384012 112 ntBASIC3.6□□□□□ -1.83
CCNFP41002 RNU6-886P-201ENST00000384319 105 ntBASIC3.6□□□□□ -1.83
CCNFP41002 ELOCP21-201ENST00000412558 336 ntBASIC3.6□□□□□ -1.83
CCNFP41002 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.6□□□□□ -1.83
CCNFP41002 RPS4XP2-201ENST00000458402 793 ntBASIC3.6□□□□□ -1.83
CCNFP41002 AL121594.1-201ENST00000475906 575 ntBASIC3.6□□□□□ -1.83
CCNFP41002 AC145146.1-201ENST00000496370 254 ntBASIC3.6□□□□□ -1.83
CCNFP41002 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.6□□□□□ -1.83
CCNFP41002 RNU6-966P-201ENST00000516479 104 ntBASIC3.6□□□□□ -1.83
CCNFP41002 SNORA27.4-201ENST00000516650 95 ntBASIC3.6□□□□□ -1.83
CCNFP41002 HSPE1P18-201ENST00000517602 280 ntBASIC3.6□□□□□ -1.83
CCNFP41002 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.6□□□□□ -1.83
CCNFP41002 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.6□□□□□ -1.83
CCNFP41002 MIR3944-201ENST00000581277 108 ntBASIC3.6□□□□□ -1.83
CCNFP41002 MIR4444-1-201ENST00000581696 74 ntBASIC3.6□□□□□ -1.83
CCNFP41002 MIR4444-2-201ENST00000584390 74 ntBASIC3.6□□□□□ -1.83
CCNFP41002 AC011471.1-201ENST00000585766 187 ntBASIC3.6□□□□□ -1.83
CCNFP41002 AC005828.6-201ENST00000606610 232 ntBASIC3.6□□□□□ -1.83
CCNFP41002 AC005520.5-201ENST00000613926 164 ntBASIC3.6□□□□□ -1.83
CCNFP41002 AL590240.4-201ENST00000616908 390 ntBASIC3.6□□□□□ -1.83
CCNFP41002 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.6□□□□□ -1.83
CCNFP41002 AL109809.4-201ENST00000603520 2185 ntBASIC3.6□□□□□ -1.83
CCNFP41002 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNFP41002 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CCNFP41002 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CCNFP41002 MIR30E-201ENST00000362104 92 ntBASIC3.59□□□□□ -1.83
CCNFP41002 RNU1-62P-201ENST00000362599 164 ntBASIC3.59□□□□□ -1.83
CCNFP41002 Y_RNA.180-201ENST00000363867 113 ntBASIC3.59□□□□□ -1.83
CCNFP41002 RNY4P28-201ENST00000365281 93 ntBASIC3.59□□□□□ -1.83
CCNFP41002 RNA5SP171-201ENST00000391071 115 ntBASIC3.59□□□□□ -1.83
CCNFP41002 RNU6ATAC-201ENST00000408749 126 ntBASIC3.59□□□□□ -1.83
CCNFP41002 AIMP1P2-201ENST00000425294 312 ntBASIC3.59□□□□□ -1.83
CCNFP41002 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.59□□□□□ -1.83
CCNFP41002 AC004386.2-201ENST00000441858 148 ntBASIC3.59□□□□□ -1.83
CCNFP41002 AL358232.1-201ENST00000448030 501 ntBASIC3.59□□□□□ -1.83
CCNFP41002 AC021205.2-201ENST00000480069 347 ntBASIC3.59□□□□□ -1.83
CCNFP41002 RPL23AP70-201ENST00000483361 460 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms