Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RPS29P27-201ENST00000463711 170 ntBASIC2.58□□□□□ -2
KRT9P35527 AC145146.1-201ENST00000496370 254 ntBASIC2.58□□□□□ -2
KRT9P35527 TRBVA-201ENST00000498804 316 ntBASIC2.58□□□□□ -2
KRT9P35527 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.58□□□□□ -2
KRT9P35527 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.58□□□□□ -2
KRT9P35527 RNU6-277P-201ENST00000516272 106 ntBASIC2.58□□□□□ -2
KRT9P35527 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.58□□□□□ -2
KRT9P35527 AP005639.2-201ENST00000527592 928 ntBASIC2.58□□□□□ -2
KRT9P35527 AP003072.1-201ENST00000531740 145 ntBASIC2.58□□□□□ -2
KRT9P35527 AC022616.8-201ENST00000533569 253 ntBASIC2.58□□□□□ -2
KRT9P35527 NDUFA5P6-201ENST00000542110 379 ntBASIC2.58□□□□□ -2
KRT9P35527 AC009127.3-201ENST00000570531 403 ntBASIC2.58□□□□□ -2
KRT9P35527 MIR4742-201ENST00000581069 85 ntBASIC2.58□□□□□ -2
KRT9P35527 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.58□□□□□ -2
KRT9P35527 AL133215.3-201ENST00000609801 448 ntBASIC2.58□□□□□ -2
KRT9P35527 AC013412.1-201ENST00000610687 192 ntBASIC2.58□□□□□ -2
KRT9P35527 AC022202.1-201ENST00000613515 211 ntBASIC2.58□□□□□ -2
KRT9P35527 AL136360.1-201ENST00000503377 1900 ntBASIC2.58□□□□□ -2
KRT9P35527 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.57□□□□□ -2
KRT9P35527 RNU6-227P-201ENST00000362865 103 ntBASIC2.57□□□□□ -2
KRT9P35527 Y_RNA.100-201ENST00000363141 102 ntBASIC2.57□□□□□ -2
KRT9P35527 SNORD114-30-201ENST00000364448 72 ntBASIC2.57□□□□□ -2
KRT9P35527 RNU4-56P-201ENST00000364700 142 ntBASIC2.57□□□□□ -2
KRT9P35527 Y_RNA.326-201ENST00000365176 113 ntBASIC2.57□□□□□ -2
KRT9P35527 Y_RNA.387-201ENST00000383918 102 ntBASIC2.57□□□□□ -2
KRT9P35527 BTF3L4P2-201ENST00000392798 346 ntBASIC2.57□□□□□ -2
KRT9P35527 RNU6-325P-201ENST00000411132 105 ntBASIC2.57□□□□□ -2
KRT9P35527 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.57□□□□□ -2
KRT9P35527 VN1R36P-201ENST00000414936 291 ntBASIC2.57□□□□□ -2
KRT9P35527 MTND3P9-201ENST00000429526 346 ntBASIC2.57□□□□□ -2
KRT9P35527 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.57□□□□□ -2
KRT9P35527 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.57□□□□□ -2
KRT9P35527 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.57□□□□□ -2
KRT9P35527 RNU6-965P-201ENST00000516721 96 ntBASIC2.57□□□□□ -2
KRT9P35527 AC026371.1-201ENST00000551867 419 ntBASIC2.57□□□□□ -2
KRT9P35527 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.57□□□□□ -2
KRT9P35527 AC026464.5-201ENST00000562497 722 ntBASIC2.57□□□□□ -2
KRT9P35527 AC233702.2-202ENST00000562547 291 ntBASIC2.57□□□□□ -2
KRT9P35527 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.57□□□□□ -2
KRT9P35527 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.57□□□□□ -2
KRT9P35527 AC022432.1-201ENST00000595739 310 ntBASIC2.57□□□□□ -2
KRT9P35527 AL133255.1-201ENST00000606374 441 ntBASIC2.57□□□□□ -2
KRT9P35527 AL161423.1-201ENST00000613700 262 ntBASIC2.57□□□□□ -2
KRT9P35527 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.57□□□□□ -2
KRT9P35527 SNORA43.4-201ENST00000629559 138 ntBASIC2.57□□□□□ -2
KRT9P35527 IGHVIII-44-202ENST00000636235 289 ntBASIC2.57□□□□□ -2
KRT9P35527 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.57□□□□□ -2
KRT9P35527 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.57□□□□□ -2
KRT9P35527 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
KRT9P35527 AC009541.1-201ENST00000438279 2662 ntBASIC2.57□□□□□ -2
KRT9P35527 AC005336.3-201ENST00000623833 2679 ntBASIC2.57□□□□□ -2
KRT9P35527 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.57□□□□□ -2
KRT9P35527 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
KRT9P35527 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
KRT9P35527 MIR144-201ENST00000384886 86 ntBASIC2.56□□□□□ -2
KRT9P35527 RNU6-1148P-201ENST00000410992 104 ntBASIC2.56□□□□□ -2
KRT9P35527 CBX3P6-201ENST00000430257 527 ntBASIC2.56□□□□□ -2
KRT9P35527 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.56□□□□□ -2
KRT9P35527 GPM6BP3-201ENST00000442797 145 ntBASIC2.56□□□□□ -2
KRT9P35527 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.56□□□□□ -2
KRT9P35527 Y_RNA.632-201ENST00000459189 102 ntBASIC2.56□□□□□ -2
KRT9P35527 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
KRT9P35527 RNU7-193P-201ENST00000516723 65 ntBASIC2.56□□□□□ -2
KRT9P35527 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.56□□□□□ -2
KRT9P35527 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.56□□□□□ -2
KRT9P35527 AL078605.1-201ENST00000603529 500 ntBASIC2.56□□□□□ -2
KRT9P35527 AL022345.1-201ENST00000607292 135 ntBASIC2.56□□□□□ -2
KRT9P35527 AL132822.1-201ENST00000617063 513 ntBASIC2.56□□□□□ -2
KRT9P35527 MIR1291-201ENST00000627649 87 ntBASIC2.56□□□□□ -2
KRT9P35527 AL450472.1-202ENST00000637286 180 ntBASIC2.56□□□□□ -2
KRT9P35527 Y_RNA.184-201ENST00000363884 108 ntBASIC2.55□□□□□ -2
KRT9P35527 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRT9P35527 Y_RNA.394-201ENST00000383942 103 ntBASIC2.55□□□□□ -2
KRT9P35527 Y_RNA.414-201ENST00000384011 101 ntBASIC2.55□□□□□ -2
KRT9P35527 RNU6-1013P-201ENST00000384180 107 ntBASIC2.55□□□□□ -2
KRT9P35527 Y_RNA.474-201ENST00000384341 102 ntBASIC2.55□□□□□ -2
KRT9P35527 SNORA46.1-201ENST00000391069 153 ntBASIC2.55□□□□□ -2
KRT9P35527 SNORA12-201ENST00000391162 147 ntBASIC2.55□□□□□ -2
KRT9P35527 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
KRT9P35527 RN7SKP284-201ENST00000411002 343 ntBASIC2.55□□□□□ -2
KRT9P35527 AL030996.1-201ENST00000411430 235 ntBASIC2.55□□□□□ -2
KRT9P35527 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.55□□□□□ -2
KRT9P35527 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
KRT9P35527 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.55□□□□□ -2
KRT9P35527 MTCO1P29-201ENST00000496868 288 ntBASIC2.55□□□□□ -2
KRT9P35527 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.55□□□□□ -2
KRT9P35527 Y_RNA.691-201ENST00000516611 103 ntBASIC2.55□□□□□ -2
KRT9P35527 RNU6-256P-201ENST00000516747 97 ntBASIC2.55□□□□□ -2
KRT9P35527 PRELID2P1-201ENST00000552837 301 ntBASIC2.55□□□□□ -2
KRT9P35527 AC021231.3-201ENST00000558497 370 ntBASIC2.55□□□□□ -2
KRT9P35527 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.55□□□□□ -2
KRT9P35527 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
KRT9P35527 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
KRT9P35527 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
KRT9P35527 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
KRT9P35527 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
KRT9P35527 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
KRT9P35527 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
KRT9P35527 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
KRT9P35527 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms