Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MTCO3P18-201ENST00000440206 761 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 AC096638.1-201ENST00000444678 216 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 RPL23AP7-203ENST00000449021 469 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 MTCYBP18-201ENST00000501056 747 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 AC011352.1-201ENST00000512300 793 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 MIR449C-201ENST00000516047 92 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 RNU1-41P-201ENST00000516161 162 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 RNU6-991P-201ENST00000516168 107 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 RNU1-48P-201ENST00000516400 162 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 RNU5F-4P-201ENST00000516581 114 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.28□□□□□ -2.04
HOXD13P35453 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.28□□□□□ -2.04
HOXD13P35453 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXD13P35453 AL022345.1-201ENST00000607292 135 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 MIR6132-201ENST00000622083 109 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 AC090617.10-201ENST00000624308 134 ntBASIC2.28□□□□□ -2.04
HOXD13P35453 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
HOXD13P35453 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.28□□□□□ -2.05
HOXD13P35453 AC009487.4-201ENST00000624969 3585 ntBASIC2.28□□□□□ -2.05
HOXD13P35453 RNU6-438P-201ENST00000365561 103 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 SNORA29-201ENST00000384183 140 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 RNA5SP338-201ENST00000410495 85 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AL139413.1-201ENST00000421309 217 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXD13P35453 DAP3P1-201ENST00000441522 278 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AL353705.4-201ENST00000449661 238 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 HMGN2P18-201ENST00000450680 270 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXD13P35453 RNU7-66P-201ENST00000459469 62 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AC090517.1-201ENST00000569307 266 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXD13P35453 MIR3672-201ENST00000584290 82 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 POLR3GP2-201ENST00000588366 668 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXD13P35453 AC023043.2-201ENST00000589678 1026 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AC025754.2-201ENST00000606491 432 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AC009994.1-201ENST00000606889 253 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AC002553.4-201ENST00000616896 331 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 AC130454.1-201ENST00000622948 401 ntBASIC2.27□□□□□ -2.05
HOXD13P35453 Y_RNA.135-201ENST00000363439 95 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 SNORD116-11-201ENST00000383882 92 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 RNU6-784P-201ENST00000384330 106 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 RNU6-160P-201ENST00000384591 107 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 RNU6-95P-201ENST00000384697 107 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 RNA5SP425-201ENST00000410336 112 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 RNA5SP508-201ENST00000411327 119 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 AL513185.2-201ENST00000425543 193 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 FTH1P25-201ENST00000447665 469 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 AL513124.1-201ENST00000450410 614 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 RNU7-187P-201ENST00000458985 68 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXD13P35453 ACA59.1-201ENST00000515966 143 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 AP005639.2-201ENST00000527592 928 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 MIR4287-201ENST00000579398 78 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 CYP2C61P-201ENST00000604072 290 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 AC019193.3-201ENST00000609144 554 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.26□□□□□ -2.05
HOXD13P35453 MIR6873-201ENST00000622788 63 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 AL359697.1-201ENST00000624879 587 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
HOXD13P35453 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HOXD13P35453 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HOXD13P35453 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HOXD13P35453 RNU1-58P-201ENST00000362413 163 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 RNU5B-2P-201ENST00000363036 113 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 Y_RNA.212-201ENST00000364177 102 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 RNU6-1026P-201ENST00000384465 108 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 MIR17-201ENST00000385012 84 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXD13P35453 RPS26P42-201ENST00000413485 326 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 HMGN2P38-201ENST00000423806 265 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 AC027124.2-201ENST00000428249 105 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 AL445646.1-201ENST00000431784 216 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 AL021397.1-201ENST00000451806 248 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 AC130509.1-201ENST00000464158 433 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 RPS29P25-201ENST00000481709 171 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 RPS23P5-201ENST00000495419 428 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 AC082651.2-201ENST00000496833 166 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.25□□□□□ -2.05
HOXD13P35453 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.25□□□□□ -2.05
HOXD13P35453 MIR5089-201ENST00000580047 84 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 SNRPGP19-201ENST00000603826 189 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 AP000907.4-201ENST00000604143 237 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 MIR3976-201ENST00000606807 139 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 Y_RNA.783-201ENST00000613546 102 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.25□□□□□ -2.05
HOXD13P35453 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
HOXD13P35453 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.24□□□□□ -2.05
HOXD13P35453 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HOXD13P35453 Y_RNA.151-201ENST00000363566 112 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 SNORA16B-201ENST00000364674 135 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 RNU11-3P-201ENST00000391111 133 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 AL512604.1-201ENST00000404812 257 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 MIR320B2-201ENST00000408479 138 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 RNU2-41P-201ENST00000410991 178 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 AL135786.1-201ENST00000415892 214 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 MTND1P4-201ENST00000435196 415 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 RNU7-14P-201ENST00000459331 62 ntBASIC2.24□□□□□ -2.05
HOXD13P35453 AC090255.1-201ENST00000495779 349 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms