Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
SFTPDP35247 RNU6-1059P-201ENST00000363752 98 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 U3.9-201ENST00000363823 204 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 RNU6-767P-201ENST00000384132 107 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 MIR144-201ENST00000384886 86 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 MIR208B-201ENST00000401172 77 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 MIR1262-201ENST00000408276 93 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 SNORA11.2-201ENST00000408318 127 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.01□□□□□ -2.09
SFTPDP35247 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.01□□□□□ -2.09
SFTPDP35247 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.01□□□□□ -2.09
SFTPDP35247 PRELID3BP1-201ENST00000457142 540 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 RPL31P58-201ENST00000469001 379 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 AC107032.1-201ENST00000485945 480 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.01□□□□□ -2.09
SFTPDP35247 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 RNU6-567P-201ENST00000516746 107 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 RNU7-30P-201ENST00000516835 62 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.01□□□□□ -2.09
SFTPDP35247 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.01□□□□□ -2.09
SFTPDP35247 EIF4A1P12-201ENST00000551910 141 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.01□□□□□ -2.09
SFTPDP35247 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.01□□□□□ -2.09
SFTPDP35247 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.01□□□□□ -2.09
SFTPDP35247 AC009994.1-201ENST00000606889 253 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 MIR6128-201ENST00000615528 109 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 FO624990.1-201ENST00000636373 85 ntBASIC2.01□□□□□ -2.09
SFTPDP35247 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SFTPDP35247 MTND5P6-201ENST00000422338 1798 ntBASIC2□□□□□ -2.09
SFTPDP35247 Z82209.1-201ENST00000422141 2135 ntBASIC2□□□□□ -2.09
SFTPDP35247 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
SFTPDP35247 AC233981.2-201ENST00000611524 1614 ntBASIC2□□□□□ -2.09
SFTPDP35247 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
SFTPDP35247 RNU6-845P-201ENST00000362578 103 ntBASIC2□□□□□ -2.09
SFTPDP35247 Y_RNA.184-201ENST00000363884 108 ntBASIC2□□□□□ -2.09
SFTPDP35247 Y_RNA.339-201ENST00000365325 102 ntBASIC2□□□□□ -2.09
SFTPDP35247 MIR548K-201ENST00000408406 116 ntBASIC2□□□□□ -2.09
SFTPDP35247 MIR548F5-201ENST00000408421 86 ntBASIC2□□□□□ -2.09
SFTPDP35247 RNA5SP494-201ENST00000410653 129 ntBASIC2□□□□□ -2.09
SFTPDP35247 RNU2-41P-201ENST00000410991 178 ntBASIC2□□□□□ -2.09
SFTPDP35247 RPL21P111-201ENST00000418453 477 ntBASIC2□□□□□ -2.09
SFTPDP35247 Z98742.3-201ENST00000418637 326 ntBASIC2□□□□□ -2.09
SFTPDP35247 PDCL2P1-201ENST00000419302 352 ntBASIC2□□□□□ -2.09
SFTPDP35247 USP9YP30-201ENST00000430729 455 ntBASIC2□□□□□ -2.09
SFTPDP35247 AL513124.1-201ENST00000450410 614 ntBASIC2□□□□□ -2.09
SFTPDP35247 PMCHL2-203ENST00000457791 237 ntBASIC2□□□□□ -2.09
SFTPDP35247 FO393415.2-201ENST00000480085 343 ntBASIC2□□□□□ -2.09
SFTPDP35247 RPL23AP75-201ENST00000491601 451 ntBASIC2□□□□□ -2.09
SFTPDP35247 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2□□□□□ -2.09
SFTPDP35247 AC046134.1-201ENST00000514454 666 ntBASIC2□□□□□ -2.09
SFTPDP35247 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2□□□□□ -2.09
SFTPDP35247 AC091544.4-201ENST00000555268 342 ntBASIC2□□□□□ -2.09
SFTPDP35247 AC009127.3-201ENST00000570531 403 ntBASIC2□□□□□ -2.09
SFTPDP35247 AL031274.2-201ENST00000599419 203 ntBASIC2□□□□□ -2.09
SFTPDP35247 B3GNTL1P2-201ENST00000603673 288 ntBASIC2□□□□□ -2.09
SFTPDP35247 SNRPGP17-201ENST00000603780 214 ntBASIC2□□□□□ -2.09
SFTPDP35247 AL022345.1-201ENST00000607292 135 ntBASIC2□□□□□ -2.09
SFTPDP35247 AC009318.2-201ENST00000610917 651 ntBASIC2□□□□□ -2.09
SFTPDP35247 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2□□□□□ -2.09
SFTPDP35247 AC099654.14-201ENST00000638599 341 ntBASIC2□□□□□ -2.09
SFTPDP35247 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
SFTPDP35247 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SFTPDP35247 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SFTPDP35247 RNA5SP126-201ENST00000365092 109 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 RNU6-26P-201ENST00000383985 107 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 Y_RNA.473-201ENST00000384333 102 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 RNU6-1093P-201ENST00000391194 107 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 SNORA3.2-201ENST00000408221 125 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 RNA5SP270-201ENST00000411361 118 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 AC138393.2-201ENST00000414742 246 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 AL139396.1-201ENST00000421137 167 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.99□□□□□ -2.09
SFTPDP35247 AL353705.4-201ENST00000449661 238 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 AL137159.1-201ENST00000452808 512 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.99□□□□□ -2.09
SFTPDP35247 TRBV12-1-201ENST00000479785 344 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 PRDX4P1-201ENST00000507189 574 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.99□□□□□ -2.09
SFTPDP35247 AC008549.1-201ENST00000512900 643 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 ACA59.1-201ENST00000515966 143 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 RNU6-991P-201ENST00000516168 107 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 RNA5SP137-201ENST00000516833 135 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 SNORA31.25-201ENST00000517242 134 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.99□□□□□ -2.09
SFTPDP35247 AC007336.1-201ENST00000576365 3828 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.99□□□□□ -2.09
SFTPDP35247 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 MIR6132-201ENST00000622083 109 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 AC012640.5-201ENST00000623897 319 ntBASIC1.99□□□□□ -2.09
SFTPDP35247 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SFTPDP35247 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SFTPDP35247 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SFTPDP35247 RNU6-842P-201ENST00000384269 107 ntBASIC1.98□□□□□ -2.09
SFTPDP35247 MIR487A-201ENST00000385009 80 ntBASIC1.98□□□□□ -2.09
SFTPDP35247 MIR549A-201ENST00000385268 96 ntBASIC1.98□□□□□ -2.09
SFTPDP35247 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SFTPDP35247 SNORD23.1-201ENST00000408212 104 ntBASIC1.98□□□□□ -2.09
SFTPDP35247 RN7SKP32-201ENST00000410167 303 ntBASIC1.98□□□□□ -2.09
SFTPDP35247 AL135786.1-201ENST00000415892 214 ntBASIC1.98□□□□□ -2.09
SFTPDP35247 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms