Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RNU1-41P-201ENST00000516161 162 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 RNU1-48P-201ENST00000516400 162 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 RNU6-323P-201ENST00000521915 107 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 OSBPL9P5-201ENST00000542581 171 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 RAB11AP2-201ENST00000545905 639 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.13□□□□□ -2.23
HLA-DMAP28067 AC021231.3-201ENST00000558497 370 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 AL158211.1-201ENST00000566763 763 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 MIR3136-201ENST00000583498 78 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 AP001836.1-201ENST00000604675 523 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 AP001596.2-201ENST00000608410 312 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 HULC.1-201ENST00000612720 240 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 AL158063.1-201ENST00000615349 536 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 uc_338.11-201ENST00000619132 160 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 AC068205.3-201ENST00000636385 468 ntBASIC1.13□□□□□ -2.23
HLA-DMAP28067 RNU6-60P-201ENST00000364792 103 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 RNU6-996P-201ENST00000365438 107 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 SNORD116-8-201ENST00000384365 95 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 RN7SKP61-201ENST00000410642 295 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.12□□□□□ -2.23
HLA-DMAP28067 CST2P1-201ENST00000425770 87 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 AC078809.1-201ENST00000427601 140 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 FTH1P25-201ENST00000447665 469 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.12□□□□□ -2.23
HLA-DMAP28067 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.12□□□□□ -2.23
HLA-DMAP28067 AC007547.1-201ENST00000462177 490 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.12□□□□□ -2.23
HLA-DMAP28067 AC005741.1-201ENST00000511094 432 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 AC090115.3-201ENST00000553218 849 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.12□□□□□ -2.23
HLA-DMAP28067 SNORA77B-201ENST00000578179 125 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 MIR3923-201ENST00000579521 83 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 Z99497.2-201ENST00000603634 310 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 Z69908.1-201ENST00000622603 247 ntBASIC1.12□□□□□ -2.23
HLA-DMAP28067 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.12□□□□□ -2.23
HLA-DMAP28067 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HLA-DMAP28067 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HLA-DMAP28067 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HLA-DMAP28067 ZNF72P-201ENST00000425869 1908 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
HLA-DMAP28067 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HLA-DMAP28067 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
HLA-DMAP28067 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 RNU6-517P-201ENST00000384362 110 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 SNORA26.3-201ENST00000391119 136 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 AL357139.1-201ENST00000407792 426 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 AL663109.1-201ENST00000411498 844 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 AC123900.1-201ENST00000420390 96 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 AL606489.2-201ENST00000433886 234 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.11□□□□□ -2.23
HLA-DMAP28067 AC116337.1-201ENST00000509680 687 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 AC090821.2-201ENST00000523552 176 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.11□□□□□ -2.23
HLA-DMAP28067 AL118558.2-201ENST00000556294 238 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 MIR5094-201ENST00000578766 85 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 MIR4424-201ENST00000585257 86 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 VN1R107P-201ENST00000601784 209 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 Z98751.3-201ENST00000604447 521 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 AL355802.3-201ENST00000607571 545 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 AC064836.2-201ENST00000609491 462 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 AC009509.4-201ENST00000619202 509 ntBASIC1.11□□□□□ -2.23
HLA-DMAP28067 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.11□□□□□ -2.23
HLA-DMAP28067 MIR302D-201ENST00000362275 68 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 RNU6-1103P-201ENST00000384150 107 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 Y_RNA.553-201ENST00000384670 102 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 MIR549A-201ENST00000385268 96 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 RNA5SP219-201ENST00000390940 113 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 RNU6-174P-201ENST00000410406 106 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 RPL37P10-201ENST00000412884 288 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 MTCO3P41-201ENST00000414801 328 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.1□□□□□ -2.23
HLA-DMAP28067 FTH1P12-201ENST00000432137 551 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC099677.2-201ENST00000436385 175 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 UBE2V1P8-201ENST00000437166 265 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HLA-DMAP28067 TPT1P7-201ENST00000458300 517 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 snoU13.6-201ENST00000458785 104 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 RNU6-956P-201ENST00000458868 103 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 RNU7-63P-201ENST00000459054 62 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 RNU7-14P-201ENST00000459331 62 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AL163973.1-201ENST00000484753 577 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC008628.2-201ENST00000502605 298 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC097473.1-201ENST00000508142 408 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.1□□□□□ -2.23
HLA-DMAP28067 DEFB131C-201ENST00000528817 165 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DMAP28067 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC019288.1-201ENST00000557918 224 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC006362.1-201ENST00000567392 174 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 MIR3683-201ENST00000580847 82 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 VN1R80P-201ENST00000597126 338 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC068790.2-201ENST00000602601 557 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 AC007684.1-201ENST00000609671 477 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
HLA-DMAP28067 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.1□□□□□ -2.23
HLA-DMAP28067 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.1□□□□□ -2.23
HLA-DMAP28067 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms