Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
RPA1P27694 Y_RNA.399-201ENST00000383955 105 ntBASIC1.93□□□□□ -2.1
RPA1P27694 Y_RNA.402-201ENST00000383972 102 ntBASIC1.93□□□□□ -2.1
RPA1P27694 RNU6-142P-201ENST00000384019 107 ntBASIC1.93□□□□□ -2.1
RPA1P27694 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPA1P27694 SNORD37.1-201ENST00000390968 65 ntBASIC1.93□□□□□ -2.1
RPA1P27694 MIR1262-201ENST00000408276 93 ntBASIC1.93□□□□□ -2.1
RPA1P27694 MIR1283-2-201ENST00000408621 87 ntBASIC1.93□□□□□ -2.1
RPA1P27694 POLHP1-201ENST00000411806 470 ntBASIC1.93□□□□□ -2.1
RPA1P27694 SNORD56-201ENST00000413522 71 ntBASIC1.93□□□□□ -2.1
RPA1P27694 UBE2V1P4-201ENST00000425374 344 ntBASIC1.93□□□□□ -2.1
RPA1P27694 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.93□□□□□ -2.1
RPA1P27694 MTND3P21-201ENST00000433774 331 ntBASIC1.93□□□□□ -2.1
RPA1P27694 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.93□□□□□ -2.1
RPA1P27694 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.93□□□□□ -2.1
RPA1P27694 RNU7-167P-201ENST00000459160 62 ntBASIC1.93□□□□□ -2.1
RPA1P27694 HMGN2P26-201ENST00000463169 339 ntBASIC1.93□□□□□ -2.1
RPA1P27694 RNU5F-2P-201ENST00000516066 82 ntBASIC1.93□□□□□ -2.1
RPA1P27694 AP005597.4-201ENST00000526762 229 ntBASIC1.93□□□□□ -2.1
RPA1P27694 AP005639.2-201ENST00000527592 928 ntBASIC1.93□□□□□ -2.1
RPA1P27694 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.93□□□□□ -2.1
RPA1P27694 AL157687.1-201ENST00000554853 619 ntBASIC1.93□□□□□ -2.1
RPA1P27694 MIR3618-201ENST00000580330 88 ntBASIC1.93□□□□□ -2.1
RPA1P27694 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.93□□□□□ -2.1
RPA1P27694 AL078605.1-201ENST00000603529 500 ntBASIC1.93□□□□□ -2.1
RPA1P27694 CYP2C61P-201ENST00000604072 290 ntBASIC1.93□□□□□ -2.1
RPA1P27694 AP000654.2-201ENST00000605633 586 ntBASIC1.93□□□□□ -2.1
RPA1P27694 AL022345.1-201ENST00000607292 135 ntBASIC1.93□□□□□ -2.1
RPA1P27694 AC073534.2-201ENST00000620377 381 ntBASIC1.93□□□□□ -2.1
RPA1P27694 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.93□□□□□ -2.1
RPA1P27694 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
RPA1P27694 Y_RNA.231-201ENST00000364358 102 ntBASIC1.92□□□□□ -2.1
RPA1P27694 RNU6-1141P-201ENST00000364520 107 ntBASIC1.92□□□□□ -2.1
RPA1P27694 Y_RNA.295-201ENST00000364918 102 ntBASIC1.92□□□□□ -2.1
RPA1P27694 MIR504-201ENST00000385065 83 ntBASIC1.92□□□□□ -2.1
RPA1P27694 BTF3L4P2-201ENST00000392798 346 ntBASIC1.92□□□□□ -2.1
RPA1P27694 FCF1P9-201ENST00000412546 282 ntBASIC1.92□□□□□ -2.1
RPA1P27694 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.92□□□□□ -2.1
RPA1P27694 TIMM9P3-201ENST00000428659 274 ntBASIC1.92□□□□□ -2.1
RPA1P27694 AC013470.1-201ENST00000453438 462 ntBASIC1.92□□□□□ -2.1
RPA1P27694 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.92□□□□□ -2.1
RPA1P27694 AC109635.3-201ENST00000529536 185 ntBASIC1.92□□□□□ -2.1
RPA1P27694 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.92□□□□□ -2.1
RPA1P27694 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.92□□□□□ -2.1
RPA1P27694 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.92□□□□□ -2.1
RPA1P27694 AC103996.1-201ENST00000555468 102 ntBASIC1.92□□□□□ -2.1
RPA1P27694 AC104581.2-201ENST00000572227 430 ntBASIC1.92□□□□□ -2.1
RPA1P27694 MIR5692C1-201ENST00000585309 91 ntBASIC1.92□□□□□ -2.1
RPA1P27694 AC012493.3-201ENST00000604494 112 ntBASIC1.92□□□□□ -2.1
RPA1P27694 AC064836.2-201ENST00000609491 462 ntBASIC1.92□□□□□ -2.1
RPA1P27694 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
RPA1P27694 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.92□□□□□ -2.1
RPA1P27694 RNU4-56P-201ENST00000364700 142 ntBASIC1.91□□□□□ -2.1
RPA1P27694 Y_RNA.373-201ENST00000365600 103 ntBASIC1.91□□□□□ -2.1
RPA1P27694 Y_RNA.390-201ENST00000383932 102 ntBASIC1.91□□□□□ -2.1
RPA1P27694 Y_RNA.453-201ENST00000384223 109 ntBASIC1.91□□□□□ -2.1
RPA1P27694 RNU11-3P-201ENST00000391111 133 ntBASIC1.91□□□□□ -2.1
RPA1P27694 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.91□□□□□ -2.1
RPA1P27694 AC078809.1-201ENST00000427601 140 ntBASIC1.91□□□□□ -2.1
RPA1P27694 SEPT14P3-201ENST00000439401 183 ntBASIC1.91□□□□□ -2.1
RPA1P27694 AC243964.1-201ENST00000441814 261 ntBASIC1.91□□□□□ -2.1
RPA1P27694 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.91□□□□□ -2.1
RPA1P27694 AL732372.2-207ENST00000445840 183 ntBASIC1.91□□□□□ -2.1
RPA1P27694 SEPT14P2-201ENST00000453405 183 ntBASIC1.91□□□□□ -2.1
RPA1P27694 RNU6-1208P-201ENST00000459588 107 ntBASIC1.91□□□□□ -2.1
RPA1P27694 SEPT14P4-201ENST00000513445 186 ntBASIC1.91□□□□□ -2.1
RPA1P27694 SNORA14.1-201ENST00000516113 141 ntBASIC1.91□□□□□ -2.1
RPA1P27694 RNU6-1069P-201ENST00000516612 133 ntBASIC1.91□□□□□ -2.1
RPA1P27694 AC069113.1-201ENST00000517763 267 ntBASIC1.91□□□□□ -2.1
RPA1P27694 FO082796.1-201ENST00000523795 183 ntBASIC1.91□□□□□ -2.1
RPA1P27694 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.91□□□□□ -2.1
RPA1P27694 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.91□□□□□ -2.1
RPA1P27694 MIR3683-201ENST00000580847 82 ntBASIC1.91□□□□□ -2.1
RPA1P27694 AC103705.1-201ENST00000619013 241 ntBASIC1.91□□□□□ -2.1
RPA1P27694 MIR3662-201ENST00000637030 95 ntBASIC1.91□□□□□ -2.1
RPA1P27694 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.91□□□□□ -2.1
RPA1P27694 Y_RNA.9-201ENST00000362354 101 ntBASIC1.9□□□□□ -2.11
RPA1P27694 SNORD115-3-201ENST00000363100 82 ntBASIC1.9□□□□□ -2.11
RPA1P27694 RNU6-1283P-201ENST00000365314 105 ntBASIC1.9□□□□□ -2.11
RPA1P27694 Y_RNA.481-201ENST00000384373 102 ntBASIC1.9□□□□□ -2.11
RPA1P27694 RNU6-692P-201ENST00000384496 107 ntBASIC1.9□□□□□ -2.11
RPA1P27694 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
RPA1P27694 AL627390.1-201ENST00000396055 340 ntBASIC1.9□□□□□ -2.11
RPA1P27694 RPS29P13-201ENST00000402041 169 ntBASIC1.9□□□□□ -2.11
RPA1P27694 AL357139.1-201ENST00000407792 426 ntBASIC1.9□□□□□ -2.11
RPA1P27694 RNU6-293P-201ENST00000411259 106 ntBASIC1.9□□□□□ -2.11
RPA1P27694 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.9□□□□□ -2.11
RPA1P27694 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.9□□□□□ -2.11
RPA1P27694 ERLEC1P1-201ENST00000433806 578 ntBASIC1.9□□□□□ -2.11
RPA1P27694 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.9□□□□□ -2.11
RPA1P27694 AC093259.1-201ENST00000509755 300 ntBASIC1.9□□□□□ -2.11
RPA1P27694 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.9□□□□□ -2.11
RPA1P27694 AC091874.1-201ENST00000511402 339 ntBASIC1.9□□□□□ -2.11
RPA1P27694 TRAV32-201ENST00000553993 340 ntBASIC1.9□□□□□ -2.11
RPA1P27694 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
RPA1P27694 AC024614.2-201ENST00000577584 372 ntBASIC1.9□□□□□ -2.11
RPA1P27694 MIR3942-201ENST00000585264 109 ntBASIC1.9□□□□□ -2.11
RPA1P27694 RNU6-85P-201ENST00000605989 107 ntBASIC1.9□□□□□ -2.11
RPA1P27694 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
RPA1P27694 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms