Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR764-201ENST00000390811 85 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 RNU6-1093P-201ENST00000391194 107 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 RNU4-55P-201ENST00000410731 137 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DPA1P20036 HMGB1P18-201ENST00000438801 619 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DPA1P20036 AC027575.1-201ENST00000481064 460 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 AC108210.2-201ENST00000503681 201 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 AC010486.3-201ENST00000511602 785 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 RNU6-612P-201ENST00000516909 102 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 AC024614.2-201ENST00000577584 372 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DPA1P20036 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.77□□□□□ -2.13
HLA-DPA1P20036 MIR8074-201ENST00000615081 81 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 AL359757.2-201ENST00000624309 274 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 MTND5P9-201ENST00000503854 1755 ntBASIC1.77□□□□□ -2.13
HLA-DPA1P20036 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HLA-DPA1P20036 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.77□□□□□ -2.13
HLA-DPA1P20036 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
HLA-DPA1P20036 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.76□□□□□ -2.13
HLA-DPA1P20036 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
HLA-DPA1P20036 RNU1-76P-201ENST00000362903 159 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 RNU6-112P-201ENST00000363599 104 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 Y_RNA.359-201ENST00000365498 102 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 AF228730.1-201ENST00000397972 663 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 RPL21P111-201ENST00000418453 477 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 AC007677.1-201ENST00000445757 515 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HLA-DPA1P20036 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DPA1P20036 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.76□□□□□ -2.13
HLA-DPA1P20036 SNORA40.12-201ENST00000516329 111 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.76□□□□□ -2.13
HLA-DPA1P20036 MIR4524B-201ENST00000581569 115 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 MIR3124-201ENST00000582636 67 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.76□□□□□ -2.13
HLA-DPA1P20036 AC083806.3-201ENST00000614016 455 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 AC084768.2-201ENST00000622736 221 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 AC090582.1-201ENST00000636321 199 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.76□□□□□ -2.13
HLA-DPA1P20036 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
HLA-DPA1P20036 AL159152.1-201ENST00000635019 2587 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 RNU6-227P-201ENST00000362865 103 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 Y_RNA.582-201ENST00000391023 95 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 CDK8P2-201ENST00000415020 547 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AL645568.3-201ENST00000433683 316 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AC007395.1-201ENST00000451333 677 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AC016925.1-201ENST00000458303 298 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.75□□□□□ -2.13
HLA-DPA1P20036 RNA5SP401-201ENST00000515920 127 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 RNU6-1038P-201ENST00000516516 104 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AC087854.1-201ENST00000519706 414 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 CENPUP1-201ENST00000526649 1202 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AC092747.3-201ENST00000603769 301 ntBASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
HLA-DPA1P20036 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.75□□□□□ -2.13
HLA-DPA1P20036 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DPA1P20036 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
HLA-DPA1P20036 MTND4P23-201ENST00000447723 1363 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 Y_RNA.132-201ENST00000363421 102 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 RNU6-82P-201ENST00000363970 107 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 RNU6-338P-201ENST00000383888 105 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC087477.1-201ENST00000465747 340 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 HMGN1P13-201ENST00000505795 138 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC096745.1-201ENST00000509945 370 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC025465.3-201ENST00000510570 311 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC079140.3-201ENST00000511111 550 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC026407.1-201ENST00000518369 204 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 RNU6-323P-201ENST00000521915 107 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AP005597.4-201ENST00000526762 229 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC103705.1-201ENST00000619013 241 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 AC139792.3-201ENST00000623525 224 ntBASIC1.74□□□□□ -2.13
HLA-DPA1P20036 SNORD48-201ENST00000364953 64 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
HLA-DPA1P20036 SNORA18.2-201ENST00000383865 132 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DPA1P20036 MTND3P9-201ENST00000429526 346 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DPA1P20036 MTCO2P16-201ENST00000436962 677 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 MTCO1P44-201ENST00000441935 243 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 snoU13.6-201ENST00000458785 104 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 RPL9P9-202ENST00000466501 579 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC005908.1-201ENST00000468701 347 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC091133.4-201ENST00000511142 308 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC025465.4-201ENST00000513422 638 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AP003034.1-201ENST00000534621 422 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC016256.1-201ENST00000547971 354 ntBASIC1.73□□□□□ -2.13
HLA-DPA1P20036 AC025423.5-201ENST00000550230 219 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms