Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CXCL3P19876 AC091895.1-201ENST00000624494 256 ntBASIC0.68□□□□□ -2.3
CXCL3P19876 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.68□□□□□ -2.3
CXCL3P19876 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.67□□□□□ -2.3
CXCL3P19876 RNU6-428P-201ENST00000362942 107 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 RNU5F-6P-201ENST00000362979 116 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 RNU6-116P-201ENST00000384042 109 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 MIR122-201ENST00000385044 85 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AL356776.1-201ENST00000406574 447 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 RNU2-64P-201ENST00000411315 191 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AL117339.3-201ENST00000418733 162 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AC010099.3-201ENST00000423896 409 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 USP9YP28-201ENST00000435142 589 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.67□□□□□ -2.3
CXCL3P19876 AL163973.1-201ENST00000484753 577 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.67□□□□□ -2.3
CXCL3P19876 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.67□□□□□ -2.3
CXCL3P19876 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CXCL3P19876 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.67□□□□□ -2.3
CXCL3P19876 Y_RNA.672-201ENST00000516289 104 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AC024995.1-201ENST00000523014 93 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 SNORA59B-202ENST00000578183 701 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AC091805.2-201ENST00000603848 235 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AL158050.2-201ENST00000605336 568 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AL121992.2-201ENST00000606262 256 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.67□□□□□ -2.3
CXCL3P19876 AC006927.3-201ENST00000638789 384 ntBASIC0.67□□□□□ -2.3
CXCL3P19876 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
CXCL3P19876 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
CXCL3P19876 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CXCL3P19876 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 SNORD114-24-201ENST00000365029 72 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 MIR222-201ENST00000384992 110 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 MIR532-201ENST00000385025 91 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 RNU6-550P-201ENST00000391057 101 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 FGF7P8-201ENST00000402994 292 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.66□□□□□ -2.3
CXCL3P19876 PIGFP2-201ENST00000421400 651 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC0.66□□□□□ -2.3
CXCL3P19876 RAB28P5-201ENST00000427490 651 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 AL365184.2-201ENST00000431139 435 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.66□□□□□ -2.3
CXCL3P19876 AL606662.1-201ENST00000445763 553 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 HSPE1P13-201ENST00000451143 297 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 RNU7-34P-201ENST00000459394 64 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 HMGN1P12-201ENST00000499125 195 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.66□□□□□ -2.3
CXCL3P19876 SNORA31.4-201ENST00000516049 129 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.66□□□□□ -2.3
CXCL3P19876 MTND4P33-201ENST00000556706 766 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.66□□□□□ -2.3
CXCL3P19876 AC098848.2-201ENST00000588023 330 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 AC008250.2-201ENST00000615261 205 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 MIR6715A-201ENST00000615929 79 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 AL133216.2-202ENST00000634512 349 ntBASIC0.66□□□□□ -2.3
CXCL3P19876 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CXCL3P19876 RNU6-715P-201ENST00000365204 103 ntBASIC0.65□□□□□ -2.31
CXCL3P19876 Y_RNA.480-201ENST00000384364 102 ntBASIC0.65□□□□□ -2.31
CXCL3P19876 AC006461.1-201ENST00000412637 326 ntBASIC0.65□□□□□ -2.31
CXCL3P19876 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.65□□□□□ -2.31
CXCL3P19876 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.65□□□□□ -2.31
CXCL3P19876 AC092473.1-201ENST00000441098 221 ntBASIC0.65□□□□□ -2.31
CXCL3P19876 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.65□□□□□ -2.31
CXCL3P19876 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.65□□□□□ -2.31
CXCL3P19876 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.65□□□□□ -2.31
CXCL3P19876 LRRC34P2-201ENST00000514850 553 ntBASIC0.65□□□□□ -2.31
CXCL3P19876 ACA64.5-201ENST00000516207 127 ntBASIC0.65□□□□□ -2.31
CXCL3P19876 RNU6-1146P-201ENST00000516282 102 ntBASIC0.65□□□□□ -2.31
CXCL3P19876 CBX3P8-201ENST00000532412 525 ntBASIC0.65□□□□□ -2.31
CXCL3P19876 snoU13.31-201ENST00000607291 104 ntBASIC0.65□□□□□ -2.31
CXCL3P19876 snoU2-30.2-201ENST00000362805 70 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 RNU6-169P-201ENST00000365336 107 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 SNORA20.2-201ENST00000383922 131 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 RNU6-418P-201ENST00000384035 107 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 RNU6-1235P-201ENST00000384559 107 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 MIR200A-201ENST00000384875 90 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 MIR208B-201ENST00000401172 77 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 MIR1283-1-201ENST00000408494 87 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 RNU6-1054P-201ENST00000411293 104 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.64□□□□□ -2.31
CXCL3P19876 AC012306.1-201ENST00000423267 114 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 Z82205.1-201ENST00000428456 297 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 HSFY7P-201ENST00000432672 318 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 HSFY8P-201ENST00000437934 318 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 MTCYBP1-201ENST00000454315 1119 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 C1DP4-201ENST00000455429 424 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 RNU6-498P-201ENST00000459468 107 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 AF131216.2-201ENST00000512316 564 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 RNU6-948P-201ENST00000516374 107 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 SCARNA24.1-201ENST00000516465 137 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.64□□□□□ -2.31
CXCL3P19876 AC022878.1-201ENST00000530684 149 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 AC008088.1-201ENST00000580993 280 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 MTCO2P2-201ENST00000591258 225 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 MIR6857-201ENST00000613267 93 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 AC009509.4-201ENST00000619202 509 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 U6.114-201ENST00000636407 96 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 AC099654.13-201ENST00000639774 207 ntBASIC0.64□□□□□ -2.31
CXCL3P19876 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms